Hb_043674_060

Information

Type -
Description -
Location Contig43674: 28632-32045
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa022673mg
description hypothetical protein
nr
ID XP_009793870.1
description PREDICTED: uncharacterized protein LOC104240691 [Nicotiana sylvestris]
swissprot
ID P20825
description Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster GN=pol PE=3 SV=1
trembl
ID M5X787
description Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa022673mg PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_043674_060 0.0 - - PREDICTED: uncharacterized protein LOC104240691 [Nicotiana sylvestris]
2 Hb_005714_110 0.0474508498 - - PREDICTED: probable indole-3-pyruvate monooxygenase YUCCA10 [Jatropha curcas]
3 Hb_153365_010 0.06597131 - - PREDICTED: uncharacterized protein LOC104236681 [Nicotiana sylvestris]
4 Hb_124518_010 0.2585228814 - - PREDICTED: uncharacterized protein LOC105763691 [Gossypium raimondii]
5 Hb_005357_090 0.2600396551 - - ubiquitin, putative [Ricinus communis]
6 Hb_001930_020 0.2605487215 - - PREDICTED: pectinesterase QRT1 [Jatropha curcas]
7 Hb_000735_150 0.2611724552 - - hypothetical protein JCGZ_15322 [Jatropha curcas]
8 Hb_002357_050 0.2664062258 - - -
9 Hb_052983_010 0.2665238661 - - MULTISPECIES: hypothetical protein, partial [Pseudomonas fluorescens group]
10 Hb_005078_030 0.2767797749 - - -
11 Hb_004757_030 0.277288819 - - -
12 Hb_000392_390 0.2842996425 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
13 Hb_000197_300 0.2976959669 - - dehydrin protein [Manihot esculenta]
14 Hb_019654_080 0.3096493932 - - -
15 Hb_001318_090 0.3122751181 - - PREDICTED: zinc finger protein 598 [Jatropha curcas]
16 Hb_012725_080 0.3130410382 - - -
17 Hb_000160_030 0.3152223595 - - putative S-adenosylmethionine-dependent methyltransferase [Morus notabilis]
18 Hb_005396_160 0.3278868807 - - PREDICTED: clavaminate synthase-like protein At3g21360 [Jatropha curcas]
19 Hb_006061_010 0.3314454326 - - PREDICTED: phytosulfokines 4-like [Populus euphratica]
20 Hb_003540_130 0.3377632131 - - -

Gene co-expression network

sample Hb_043674_060 Hb_043674_060 Hb_005714_110 Hb_005714_110 Hb_043674_060--Hb_005714_110 Hb_153365_010 Hb_153365_010 Hb_043674_060--Hb_153365_010 Hb_124518_010 Hb_124518_010 Hb_043674_060--Hb_124518_010 Hb_005357_090 Hb_005357_090 Hb_043674_060--Hb_005357_090 Hb_001930_020 Hb_001930_020 Hb_043674_060--Hb_001930_020 Hb_000735_150 Hb_000735_150 Hb_043674_060--Hb_000735_150 Hb_005714_110--Hb_153365_010 Hb_052983_010 Hb_052983_010 Hb_005714_110--Hb_052983_010 Hb_000197_300 Hb_000197_300 Hb_005714_110--Hb_000197_300 Hb_005714_110--Hb_001930_020 Hb_005714_110--Hb_005357_090 Hb_153365_010--Hb_052983_010 Hb_153365_010--Hb_000197_300 Hb_002357_050 Hb_002357_050 Hb_153365_010--Hb_002357_050 Hb_153365_010--Hb_001930_020 Hb_124518_010--Hb_005357_090 Hb_124518_010--Hb_001930_020 Hb_124518_010--Hb_000735_150 Hb_124518_010--Hb_002357_050 Hb_005078_030 Hb_005078_030 Hb_124518_010--Hb_005078_030 Hb_004757_030 Hb_004757_030 Hb_124518_010--Hb_004757_030 Hb_005357_090--Hb_001930_020 Hb_005357_090--Hb_002357_050 Hb_005357_090--Hb_000735_150 Hb_005357_090--Hb_005078_030 Hb_005357_090--Hb_004757_030 Hb_001930_020--Hb_002357_050 Hb_001930_020--Hb_005078_030 Hb_001930_020--Hb_004757_030 Hb_001930_020--Hb_000735_150 Hb_000735_150--Hb_002357_050 Hb_000735_150--Hb_005078_030 Hb_000735_150--Hb_004757_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0209956 0 0 0 0.00654981 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.0238626 0 0

CAGE analysis