Hb_135624_010

Information

Type -
Description -
Location Contig135624: 39-766
Sequence    

Annotation

kegg
ID rcu:RCOM_1274910
description sugar transporter, putative (EC:1.3.1.74)
nr
ID XP_012074024.1
description PREDICTED: inositol transporter 4-like [Jatropha curcas]
swissprot
ID Q9ZQP6
description Probable inositol transporter 3 OS=Arabidopsis thaliana GN=INT3 PE=2 SV=1
trembl
ID A0A067KN51
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09508 PE=3 SV=1
Gene Ontology
ID GO:0016021
description inositol transporter 4-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_135624_010 0.0 - - PREDICTED: inositol transporter 4-like [Jatropha curcas]
2 Hb_062244_010 0.1220945317 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
3 Hb_004413_030 0.1350343254 - - Retrotransposon protein, putative [Theobroma cacao]
4 Hb_001009_130 0.1418734005 - - hypothetical protein JCGZ_11336 [Jatropha curcas]
5 Hb_005532_010 0.235360991 - - -
6 Hb_000144_140 0.249704809 - - PREDICTED: uncharacterized protein LOC105629608 [Jatropha curcas]
7 Hb_006344_010 0.2535404402 - - -
8 Hb_008147_010 0.2687941446 - - hypothetical protein, partial [Pseudomonas fluorescens]
9 Hb_002028_100 0.2719802516 - - PREDICTED: uncharacterized protein LOC102624085 [Citrus sinensis]
10 Hb_003446_040 0.2728928389 - - -
11 Hb_001277_310 0.2816324444 - - PREDICTED: putative ribonuclease H protein At1g65750 [Phoenix dactylifera]
12 Hb_010142_080 0.2830445227 - - PREDICTED: uncharacterized protein LOC105630660 [Jatropha curcas]
13 Hb_004321_010 0.2832928408 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
14 Hb_021616_010 0.3137993559 - - -
15 Hb_000042_190 0.3169891486 - - conserved hypothetical protein [Ricinus communis]
16 Hb_001534_170 0.3226116423 - - Uncharacterized protein TCM_038456 [Theobroma cacao]
17 Hb_009421_010 0.3241874088 - - -
18 Hb_003752_050 0.3245883083 - - hypothetical protein JCGZ_15078 [Jatropha curcas]
19 Hb_186982_010 0.3375443625 - - PREDICTED: uncharacterized protein LOC104120222 [Nicotiana tomentosiformis]
20 Hb_001195_390 0.3410087495 - - PREDICTED: glucan endo-1,3-beta-glucosidase 7-like [Populus euphratica]

Gene co-expression network

sample Hb_135624_010 Hb_135624_010 Hb_062244_010 Hb_062244_010 Hb_135624_010--Hb_062244_010 Hb_004413_030 Hb_004413_030 Hb_135624_010--Hb_004413_030 Hb_001009_130 Hb_001009_130 Hb_135624_010--Hb_001009_130 Hb_005532_010 Hb_005532_010 Hb_135624_010--Hb_005532_010 Hb_000144_140 Hb_000144_140 Hb_135624_010--Hb_000144_140 Hb_006344_010 Hb_006344_010 Hb_135624_010--Hb_006344_010 Hb_062244_010--Hb_005532_010 Hb_062244_010--Hb_004413_030 Hb_062244_010--Hb_001009_130 Hb_010142_080 Hb_010142_080 Hb_062244_010--Hb_010142_080 Hb_021616_010 Hb_021616_010 Hb_062244_010--Hb_021616_010 Hb_004413_030--Hb_005532_010 Hb_004413_030--Hb_001009_130 Hb_003446_040 Hb_003446_040 Hb_004413_030--Hb_003446_040 Hb_001277_310 Hb_001277_310 Hb_004413_030--Hb_001277_310 Hb_001009_130--Hb_000144_140 Hb_001009_130--Hb_001277_310 Hb_001009_130--Hb_003446_040 Hb_005532_010--Hb_010142_080 Hb_005532_010--Hb_021616_010 Hb_009421_010 Hb_009421_010 Hb_005532_010--Hb_009421_010 Hb_005483_010 Hb_005483_010 Hb_005532_010--Hb_005483_010 Hb_000144_140--Hb_001277_310 Hb_000144_140--Hb_062244_010 Hb_000144_140--Hb_004413_030 Hb_000144_140--Hb_003446_040 Hb_140572_010 Hb_140572_010 Hb_006344_010--Hb_140572_010 Hb_001021_060 Hb_001021_060 Hb_006344_010--Hb_001021_060 Hb_001195_390 Hb_001195_390 Hb_006344_010--Hb_001195_390 Hb_006344_010--Hb_004413_030 Hb_006344_010--Hb_001277_310
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0468856 0 0 0 0 0.0418551
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.148746 0.0352697 0

CAGE analysis