Hb_000252_030

Information

Type -
Description -
Location Contig252: 24163-24889
Sequence    

Annotation

kegg
ID rcu:RCOM_0024110
description Heme-binding protein, putative
nr
ID XP_002527903.1
description Heme-binding protein, putative [Ricinus communis]
swissprot
ID Q9Y5Z4
description Heme-binding protein 2 OS=Homo sapiens GN=HEBP2 PE=1 SV=1
trembl
ID B9SPI4
description Heme-binding protein, putative OS=Ricinus communis GN=RCOM_0024110 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000252_030 0.0 - - Heme-binding protein, putative [Ricinus communis]
2 Hb_108886_010 0.2492095682 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
3 Hb_001021_060 0.2698137741 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
4 Hb_003952_140 0.2724166093 - - hypothetical protein POPTR_0001s24960g [Populus trichocarpa]
5 Hb_021419_050 0.2904070284 - - PREDICTED: putative receptor-like protein kinase At3g47110 [Malus domestica]
6 Hb_001338_060 0.3087952981 - - -
7 Hb_000042_140 0.31044638 - - hypothetical protein POPTR_0001s41640g, partial [Populus trichocarpa]
8 Hb_003025_070 0.3216218707 - - PREDICTED: uncharacterized protein LOC103419743 [Malus domestica]
9 Hb_001008_040 0.3331010589 - - Late embryogenesis abundant protein D-7, putative [Ricinus communis]
10 Hb_003446_040 0.3397820976 - - -
11 Hb_132915_010 0.3515645568 - - PREDICTED: uncharacterized protein LOC103700431, partial [Phoenix dactylifera]
12 Hb_001976_080 0.3518643419 transcription factor TF Family: AP2 PREDICTED: AP2-like ethylene-responsive transcription factor AIL6 [Jatropha curcas]
13 Hb_181909_010 0.355745209 - - PREDICTED: uncharacterized protein LOC105786773 [Gossypium raimondii]
14 Hb_000000_100 0.357483915 - - hypothetical protein POPTR_0002s13260g [Populus trichocarpa]
15 Hb_001221_270 0.3639464136 - - -
16 Hb_015707_010 0.3684931439 - - hypothetical protein JCGZ_09913 [Jatropha curcas]
17 Hb_007537_010 0.369399588 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
18 Hb_004413_030 0.3715360716 - - Retrotransposon protein, putative [Theobroma cacao]
19 Hb_008225_070 0.3795090712 - - PREDICTED: uncharacterized protein LOC105636491 [Jatropha curcas]
20 Hb_008511_010 0.3824013908 - - PREDICTED: putative proline-rich receptor-like protein kinase PERK6 [Jatropha curcas]

Gene co-expression network

sample Hb_000252_030 Hb_000252_030 Hb_108886_010 Hb_108886_010 Hb_000252_030--Hb_108886_010 Hb_001021_060 Hb_001021_060 Hb_000252_030--Hb_001021_060 Hb_003952_140 Hb_003952_140 Hb_000252_030--Hb_003952_140 Hb_021419_050 Hb_021419_050 Hb_000252_030--Hb_021419_050 Hb_001338_060 Hb_001338_060 Hb_000252_030--Hb_001338_060 Hb_000042_140 Hb_000042_140 Hb_000252_030--Hb_000042_140 Hb_108886_010--Hb_001338_060 Hb_005045_040 Hb_005045_040 Hb_108886_010--Hb_005045_040 Hb_003025_070 Hb_003025_070 Hb_108886_010--Hb_003025_070 Hb_003777_010 Hb_003777_010 Hb_108886_010--Hb_003777_010 Hb_108886_010--Hb_021419_050 Hb_006344_010 Hb_006344_010 Hb_001021_060--Hb_006344_010 Hb_140572_010 Hb_140572_010 Hb_001021_060--Hb_140572_010 Hb_001021_060--Hb_003952_140 Hb_005914_240 Hb_005914_240 Hb_001021_060--Hb_005914_240 Hb_007753_020 Hb_007753_020 Hb_001021_060--Hb_007753_020 Hb_179112_010 Hb_179112_010 Hb_003952_140--Hb_179112_010 Hb_123521_010 Hb_123521_010 Hb_003952_140--Hb_123521_010 Hb_003952_140--Hb_108886_010 Hb_183612_030 Hb_183612_030 Hb_003952_140--Hb_183612_030 Hb_021419_050--Hb_003025_070 Hb_008835_010 Hb_008835_010 Hb_021419_050--Hb_008835_010 Hb_150851_010 Hb_150851_010 Hb_021419_050--Hb_150851_010 Hb_012399_010 Hb_012399_010 Hb_021419_050--Hb_012399_010 Hb_000061_280 Hb_000061_280 Hb_021419_050--Hb_000061_280 Hb_004680_030 Hb_004680_030 Hb_021419_050--Hb_004680_030 Hb_001338_060--Hb_005045_040 Hb_001338_060--Hb_003777_010 Hb_001545_030 Hb_001545_030 Hb_001338_060--Hb_001545_030 Hb_071586_010 Hb_071586_010 Hb_001338_060--Hb_071586_010 Hb_001462_020 Hb_001462_020 Hb_001338_060--Hb_001462_020 Hb_000042_140--Hb_003025_070 Hb_000042_140--Hb_021419_050 Hb_000042_140--Hb_108886_010 Hb_178607_010 Hb_178607_010 Hb_000042_140--Hb_178607_010 Hb_015707_010 Hb_015707_010 Hb_000042_140--Hb_015707_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0394875 0.16102 0 0 0 0.195681
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.380729 0.0293673 0

CAGE analysis