Hb_015707_010

Information

Type -
Description -
Location Contig15707: 656-4652
Sequence    

Annotation

kegg
ID rcu:RCOM_0817130
description serine/threonine-protein kinase bri1, putative (EC:1.3.1.74)
nr
ID KDP35941.1
description hypothetical protein JCGZ_09913 [Jatropha curcas]
swissprot
ID C0LGQ4
description Probable LRR receptor-like serine/threonine-protein kinase MRH1 OS=Arabidopsis thaliana GN=MRH1 PE=2 SV=1
trembl
ID A0A067KI84
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09913 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_13705: 964-1071
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_015707_010 0.0 - - hypothetical protein JCGZ_09913 [Jatropha curcas]
2 Hb_097968_010 0.2096976337 - - hypothetical protein PRUPE_ppa001143mg [Prunus persica]
3 Hb_002028_100 0.2275796525 - - PREDICTED: uncharacterized protein LOC102624085 [Citrus sinensis]
4 Hb_003881_050 0.2395173954 - - PREDICTED: uncharacterized protein LOC104213140 [Nicotiana sylvestris]
5 Hb_038011_010 0.2416960949 - - hypothetical protein POPTR_0031s004401g, partial [Populus trichocarpa]
6 Hb_099864_010 0.2476172562 - - Disease resistance protein RPM1, putative [Ricinus communis]
7 Hb_090497_010 0.2477512545 - - PREDICTED: Werner Syndrome-like exonuclease [Jatropha curcas]
8 Hb_010317_030 0.2524451714 - - unknown [Picea sitchensis]
9 Hb_002733_030 0.2625360167 - - PREDICTED: uncharacterized protein LOC104248159 [Nicotiana sylvestris]
10 Hb_004103_030 0.2670467363 - - conserved hypothetical protein [Ricinus communis]
11 Hb_085863_020 0.2672972636 transcription factor TF Family: MYB-related PREDICTED: telomere repeat-binding factor 1 [Jatropha curcas]
12 Hb_030291_020 0.2729317889 - - PREDICTED: protein argonaute 5 isoform X2 [Jatropha curcas]
13 Hb_002232_450 0.2733401577 - - PREDICTED: probable methyltransferase PMT11 [Jatropha curcas]
14 Hb_005656_060 0.2797749355 - - -
15 Hb_000431_020 0.2830520519 - - hypothetical protein JCGZ_06801 [Jatropha curcas]
16 Hb_000101_160 0.2859993251 - - PREDICTED: uncharacterized protein LOC105133607 isoform X1 [Populus euphratica]
17 Hb_182424_010 0.2886382565 - - PREDICTED: U-box domain-containing protein 51 [Jatropha curcas]
18 Hb_002374_430 0.289258456 - - conserved hypothetical protein [Ricinus communis]
19 Hb_025457_010 0.293449204 - - -
20 Hb_000038_030 0.2940109912 - - PREDICTED: probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7-like [Glycine max]

Gene co-expression network

sample Hb_015707_010 Hb_015707_010 Hb_097968_010 Hb_097968_010 Hb_015707_010--Hb_097968_010 Hb_002028_100 Hb_002028_100 Hb_015707_010--Hb_002028_100 Hb_003881_050 Hb_003881_050 Hb_015707_010--Hb_003881_050 Hb_038011_010 Hb_038011_010 Hb_015707_010--Hb_038011_010 Hb_099864_010 Hb_099864_010 Hb_015707_010--Hb_099864_010 Hb_090497_010 Hb_090497_010 Hb_015707_010--Hb_090497_010 Hb_004103_030 Hb_004103_030 Hb_097968_010--Hb_004103_030 Hb_025457_010 Hb_025457_010 Hb_097968_010--Hb_025457_010 Hb_097968_010--Hb_002028_100 Hb_024505_050 Hb_024505_050 Hb_097968_010--Hb_024505_050 Hb_009421_010 Hb_009421_010 Hb_097968_010--Hb_009421_010 Hb_002733_030 Hb_002733_030 Hb_002028_100--Hb_002733_030 Hb_002232_450 Hb_002232_450 Hb_002028_100--Hb_002232_450 Hb_000590_040 Hb_000590_040 Hb_002028_100--Hb_000590_040 Hb_002028_100--Hb_025457_010 Hb_003881_050--Hb_038011_010 Hb_001242_090 Hb_001242_090 Hb_003881_050--Hb_001242_090 Hb_085863_020 Hb_085863_020 Hb_003881_050--Hb_085863_020 Hb_073452_010 Hb_073452_010 Hb_003881_050--Hb_073452_010 Hb_003881_050--Hb_090497_010 Hb_003688_160 Hb_003688_160 Hb_003881_050--Hb_003688_160 Hb_038011_010--Hb_090497_010 Hb_038011_010--Hb_073452_010 Hb_048116_010 Hb_048116_010 Hb_038011_010--Hb_048116_010 Hb_011287_090 Hb_011287_090 Hb_038011_010--Hb_011287_090 Hb_038011_010--Hb_099864_010 Hb_002326_050 Hb_002326_050 Hb_038011_010--Hb_002326_050 Hb_182424_010 Hb_182424_010 Hb_099864_010--Hb_182424_010 Hb_000431_020 Hb_000431_020 Hb_099864_010--Hb_000431_020 Hb_011218_060 Hb_011218_060 Hb_099864_010--Hb_011218_060 Hb_127003_010 Hb_127003_010 Hb_099864_010--Hb_127003_010 Hb_099864_010--Hb_011287_090 Hb_004899_060 Hb_004899_060 Hb_090497_010--Hb_004899_060 Hb_000101_160 Hb_000101_160 Hb_090497_010--Hb_000101_160 Hb_000099_210 Hb_000099_210 Hb_090497_010--Hb_000099_210 Hb_012725_100 Hb_012725_100 Hb_090497_010--Hb_012725_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0713885 0.0314585 0.0135354 0.0126985 0.0746884 0.161879
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.235612 0.0615286 0

CAGE analysis