Hb_011218_060

Information

Type -
Description -
Location Contig11218: 55882-62681
Sequence    

Annotation

kegg
ID rcu:RCOM_1078690
description Dephospho-CoA kinase, putative (EC:2.7.1.24)
nr
ID XP_012082718.1
description PREDICTED: dephospho-CoA kinase-like [Jatropha curcas]
swissprot
ID Q94DR2
description Dephospho-CoA kinase OS=Oryza sativa subsp. japonica GN=Os01g0360600 PE=2 SV=1
trembl
ID A0A067JVY4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13897 PE=3 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_03673: 61721-62120
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_011218_060 0.0 - - PREDICTED: dephospho-CoA kinase-like [Jatropha curcas]
2 Hb_002391_230 0.1382822963 - - hypothetical protein RCOM_0745080 [Ricinus communis]
3 Hb_000291_280 0.1500001586 - - PREDICTED: LOW QUALITY PROTEIN: myosin-11 [Jatropha curcas]
4 Hb_182424_010 0.1566303909 - - PREDICTED: U-box domain-containing protein 51 [Jatropha curcas]
5 Hb_005227_070 0.160351207 - - serine/threonine protein kinase, putative [Ricinus communis]
6 Hb_000622_310 0.1685334882 - - PREDICTED: BON1-associated protein 2 [Jatropha curcas]
7 Hb_011909_040 0.1745838938 - - hypothetical protein JCGZ_00750 [Jatropha curcas]
8 Hb_003209_020 0.1752032914 - - PREDICTED: 26S proteasome non-ATPase regulatory subunit 10 [Jatropha curcas]
9 Hb_098993_010 0.1753852109 - - PREDICTED: chaperone protein dnaJ 72 isoform X2 [Jatropha curcas]
10 Hb_000038_030 0.1759613451 - - PREDICTED: probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7-like [Glycine max]
11 Hb_000208_290 0.1787647199 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 2 isoform X2 [Jatropha curcas]
12 Hb_004156_060 0.1788344458 - - neutral/alkaline invertase 1 [Hevea brasiliensis]
13 Hb_000088_040 0.1795041134 - - PREDICTED: multiple C2 and transmembrane domain-containing protein 2 [Jatropha curcas]
14 Hb_001767_010 0.1802272996 - - PREDICTED: probable RNA helicase SDE3 [Populus euphratica]
15 Hb_000193_250 0.1811684417 - - PREDICTED: pentatricopeptide repeat-containing protein At5g61400 [Jatropha curcas]
16 Hb_006091_030 0.1837261024 desease resistance Gene Name: AAA PREDICTED: cell division control protein 48 homolog C-like isoform X1 [Jatropha curcas]
17 Hb_000230_110 0.184813696 - - PREDICTED: uncharacterized protein LOC105647634 [Jatropha curcas]
18 Hb_000592_050 0.185346847 - - PREDICTED: golgin candidate 2 [Jatropha curcas]
19 Hb_000427_030 0.1853958779 - - conserved hypothetical protein [Ricinus communis]
20 Hb_000490_030 0.1872059367 - - DNA-directed RNA polymerase II subunit, putative [Ricinus communis]

Gene co-expression network

sample Hb_011218_060 Hb_011218_060 Hb_002391_230 Hb_002391_230 Hb_011218_060--Hb_002391_230 Hb_000291_280 Hb_000291_280 Hb_011218_060--Hb_000291_280 Hb_182424_010 Hb_182424_010 Hb_011218_060--Hb_182424_010 Hb_005227_070 Hb_005227_070 Hb_011218_060--Hb_005227_070 Hb_000622_310 Hb_000622_310 Hb_011218_060--Hb_000622_310 Hb_011909_040 Hb_011909_040 Hb_011218_060--Hb_011909_040 Hb_001856_020 Hb_001856_020 Hb_002391_230--Hb_001856_020 Hb_000193_250 Hb_000193_250 Hb_002391_230--Hb_000193_250 Hb_000056_100 Hb_000056_100 Hb_002391_230--Hb_000056_100 Hb_000134_350 Hb_000134_350 Hb_002391_230--Hb_000134_350 Hb_007943_080 Hb_007943_080 Hb_002391_230--Hb_007943_080 Hb_000291_280--Hb_005227_070 Hb_000427_030 Hb_000427_030 Hb_000291_280--Hb_000427_030 Hb_098993_010 Hb_098993_010 Hb_000291_280--Hb_098993_010 Hb_000088_040 Hb_000088_040 Hb_000291_280--Hb_000088_040 Hb_022148_010 Hb_022148_010 Hb_000291_280--Hb_022148_010 Hb_127003_010 Hb_127003_010 Hb_000291_280--Hb_127003_010 Hb_182424_010--Hb_127003_010 Hb_099864_010 Hb_099864_010 Hb_182424_010--Hb_099864_010 Hb_011287_090 Hb_011287_090 Hb_182424_010--Hb_011287_090 Hb_170193_010 Hb_170193_010 Hb_182424_010--Hb_170193_010 Hb_000041_150 Hb_000041_150 Hb_182424_010--Hb_000041_150 Hb_034083_010 Hb_034083_010 Hb_005227_070--Hb_034083_010 Hb_012055_020 Hb_012055_020 Hb_005227_070--Hb_012055_020 Hb_002997_100 Hb_002997_100 Hb_005227_070--Hb_002997_100 Hb_005227_070--Hb_098993_010 Hb_005227_070--Hb_000088_040 Hb_000124_020 Hb_000124_020 Hb_000622_310--Hb_000124_020 Hb_010863_080 Hb_010863_080 Hb_000622_310--Hb_010863_080 Hb_000186_240 Hb_000186_240 Hb_000622_310--Hb_000186_240 Hb_000592_050 Hb_000592_050 Hb_000622_310--Hb_000592_050 Hb_000172_400 Hb_000172_400 Hb_000622_310--Hb_000172_400 Hb_000179_210 Hb_000179_210 Hb_000622_310--Hb_000179_210 Hb_001488_100 Hb_001488_100 Hb_011909_040--Hb_001488_100 Hb_000340_430 Hb_000340_430 Hb_011909_040--Hb_000340_430 Hb_002007_270 Hb_002007_270 Hb_011909_040--Hb_002007_270 Hb_001999_060 Hb_001999_060 Hb_011909_040--Hb_001999_060 Hb_000789_190 Hb_000789_190 Hb_011909_040--Hb_000789_190 Hb_011909_040--Hb_000193_250
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.919533 0.289952 0.0392829 0.22485 1.93236 1.41196
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.358968 0.65812 2.09924 0.543869 0

CAGE analysis