Hb_000622_310

Information

Type -
Description -
Location Contig622: 258222-260488
Sequence    

Annotation

kegg
ID -
description -
nr
ID XP_012083280.1
description PREDICTED: BON1-associated protein 2 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067K0E2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14309 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_51585: 258515-258722
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000622_310 0.0 - - PREDICTED: BON1-associated protein 2 [Jatropha curcas]
2 Hb_000124_020 0.088138467 - - PREDICTED: uncharacterized protein LOC105636589 [Jatropha curcas]
3 Hb_010863_080 0.0887058244 - - PREDICTED: membrane-anchored ubiquitin-fold protein 3-like [Jatropha curcas]
4 Hb_000186_240 0.0938361934 - - PREDICTED: 39S ribosomal protein L4, mitochondrial [Jatropha curcas]
5 Hb_000592_050 0.0950903051 - - PREDICTED: golgin candidate 2 [Jatropha curcas]
6 Hb_000172_400 0.0986344774 - - Aspartic proteinase nepenthesin-1 precursor, putative [Ricinus communis]
7 Hb_000179_210 0.1001481545 - - PREDICTED: uncharacterized protein LOC105637927 [Jatropha curcas]
8 Hb_182026_020 0.1026221936 - - PREDICTED: SUN domain-containing protein 3-like [Jatropha curcas]
9 Hb_002007_270 0.102874441 - - PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At3g05340-like [Jatropha curcas]
10 Hb_000056_100 0.1063208318 - - PREDICTED: uncharacterized protein LOC105630404 isoform X1 [Jatropha curcas]
11 Hb_003297_030 0.1081068311 - - PREDICTED: uncharacterized protein LOC105640530 [Jatropha curcas]
12 Hb_010638_020 0.1125209748 - - PREDICTED: uncharacterized protein LOC105638189 isoform X3 [Jatropha curcas]
13 Hb_098993_010 0.1126771601 - - PREDICTED: chaperone protein dnaJ 72 isoform X2 [Jatropha curcas]
14 Hb_000576_030 0.1135992695 - - PREDICTED: pentatricopeptide repeat-containing protein At2g20540 [Jatropha curcas]
15 Hb_000417_180 0.1159954697 - - 60S ribosomal protein L11, putative [Ricinus communis]
16 Hb_006501_040 0.11704604 - - PREDICTED: pentatricopeptide repeat-containing protein At1g77170 [Jatropha curcas]
17 Hb_048985_010 0.1185009178 - - -
18 Hb_000856_340 0.1194903212 - - PREDICTED: uncharacterized protein LOC105640501 [Jatropha curcas]
19 Hb_002026_100 0.1201778132 transcription factor TF Family: ARID PREDICTED: AT-rich interactive domain-containing protein 2 isoform X2 [Jatropha curcas]
20 Hb_011918_080 0.1213698031 - - PREDICTED: probable serine/threonine protein kinase IREH1 isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_000622_310 Hb_000622_310 Hb_000124_020 Hb_000124_020 Hb_000622_310--Hb_000124_020 Hb_010863_080 Hb_010863_080 Hb_000622_310--Hb_010863_080 Hb_000186_240 Hb_000186_240 Hb_000622_310--Hb_000186_240 Hb_000592_050 Hb_000592_050 Hb_000622_310--Hb_000592_050 Hb_000172_400 Hb_000172_400 Hb_000622_310--Hb_000172_400 Hb_000179_210 Hb_000179_210 Hb_000622_310--Hb_000179_210 Hb_000056_100 Hb_000056_100 Hb_000124_020--Hb_000056_100 Hb_000124_020--Hb_010863_080 Hb_000124_020--Hb_000179_210 Hb_000116_470 Hb_000116_470 Hb_000124_020--Hb_000116_470 Hb_005147_090 Hb_005147_090 Hb_000124_020--Hb_005147_090 Hb_003297_030 Hb_003297_030 Hb_010863_080--Hb_003297_030 Hb_000417_180 Hb_000417_180 Hb_010863_080--Hb_000417_180 Hb_000155_190 Hb_000155_190 Hb_010863_080--Hb_000155_190 Hb_168707_030 Hb_168707_030 Hb_010863_080--Hb_168707_030 Hb_010863_080--Hb_000179_210 Hb_004195_160 Hb_004195_160 Hb_010863_080--Hb_004195_160 Hb_000200_340 Hb_000200_340 Hb_000186_240--Hb_000200_340 Hb_000186_240--Hb_000592_050 Hb_000186_240--Hb_000179_210 Hb_010638_020 Hb_010638_020 Hb_000186_240--Hb_010638_020 Hb_000110_160 Hb_000110_160 Hb_000186_240--Hb_000110_160 Hb_000186_240--Hb_010863_080 Hb_000592_050--Hb_000172_400 Hb_000592_050--Hb_000179_210 Hb_000358_080 Hb_000358_080 Hb_000592_050--Hb_000358_080 Hb_010710_010 Hb_010710_010 Hb_000592_050--Hb_010710_010 Hb_002207_100 Hb_002207_100 Hb_000172_400--Hb_002207_100 Hb_000784_090 Hb_000784_090 Hb_000172_400--Hb_000784_090 Hb_001454_060 Hb_001454_060 Hb_000172_400--Hb_001454_060 Hb_000340_510 Hb_000340_510 Hb_000172_400--Hb_000340_510 Hb_001030_120 Hb_001030_120 Hb_000172_400--Hb_001030_120 Hb_003638_030 Hb_003638_030 Hb_000172_400--Hb_003638_030 Hb_006501_040 Hb_006501_040 Hb_000179_210--Hb_006501_040 Hb_178968_110 Hb_178968_110 Hb_000179_210--Hb_178968_110 Hb_001085_170 Hb_001085_170 Hb_000179_210--Hb_001085_170 Hb_000059_220 Hb_000059_220 Hb_000179_210--Hb_000059_220 Hb_000457_150 Hb_000457_150 Hb_000179_210--Hb_000457_150 Hb_000179_210--Hb_003297_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.466085 0.208711 0.0351923 0.139817 0.639231 0.590238
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.318937 0.54369 0.710707 0.174974 0.0439854

CAGE analysis