Hb_000124_020

Information

Type -
Description -
Location Contig124: 19582-20385
Sequence    

Annotation

kegg
ID rcu:RCOM_0157540
description hypothetical protein
nr
ID XP_012075291.1
description PREDICTED: uncharacterized protein LOC105636589 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KGF9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09460 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_07295: 20055-20320
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000124_020 0.0 - - PREDICTED: uncharacterized protein LOC105636589 [Jatropha curcas]
2 Hb_000622_310 0.088138467 - - PREDICTED: BON1-associated protein 2 [Jatropha curcas]
3 Hb_000056_100 0.0938750819 - - PREDICTED: uncharacterized protein LOC105630404 isoform X1 [Jatropha curcas]
4 Hb_010863_080 0.0996375636 - - PREDICTED: membrane-anchored ubiquitin-fold protein 3-like [Jatropha curcas]
5 Hb_000179_210 0.1047334309 - - PREDICTED: uncharacterized protein LOC105637927 [Jatropha curcas]
6 Hb_000116_470 0.1076744151 - - PREDICTED: AT-hook motif nuclear-localized protein 10-like [Jatropha curcas]
7 Hb_005147_090 0.1078767536 - - PREDICTED: KH domain-containing protein At1g09660/At1g09670 isoform X1 [Jatropha curcas]
8 Hb_021068_050 0.1095408888 - - PREDICTED: probable rhamnogalacturonate lyase B [Jatropha curcas]
9 Hb_006501_040 0.112289973 - - PREDICTED: pentatricopeptide repeat-containing protein At1g77170 [Jatropha curcas]
10 Hb_000297_200 0.1128737778 - - PREDICTED: pentatricopeptide repeat-containing protein At2g33760-like [Vitis vinifera]
11 Hb_005333_130 0.1134408726 - - conserved hypothetical protein [Ricinus communis]
12 Hb_002890_280 0.1169775777 - - hypothetical protein PRUPE_ppa009665mg [Prunus persica]
13 Hb_001123_230 0.1188950332 - - PREDICTED: uncharacterized protein LOC105647321 [Jatropha curcas]
14 Hb_000186_240 0.1198140214 - - PREDICTED: 39S ribosomal protein L4, mitochondrial [Jatropha curcas]
15 Hb_000836_070 0.1200422371 - - protein binding protein, putative [Ricinus communis]
16 Hb_002119_060 0.1203327157 transcription factor TF Family: Orphans histidine kinase 1, 2, 3 plant, putative [Ricinus communis]
17 Hb_000059_220 0.1210077637 - - PREDICTED: CBL-interacting protein kinase 2 [Jatropha curcas]
18 Hb_006551_010 0.1227741849 - - electron transporter, putative [Ricinus communis]
19 Hb_001856_020 0.1242965553 transcription factor TF Family: Orphans ethylene receptor, putative [Ricinus communis]
20 Hb_003025_090 0.1246988441 - - hypothetical protein B456_002G103400 [Gossypium raimondii]

Gene co-expression network

sample Hb_000124_020 Hb_000124_020 Hb_000622_310 Hb_000622_310 Hb_000124_020--Hb_000622_310 Hb_000056_100 Hb_000056_100 Hb_000124_020--Hb_000056_100 Hb_010863_080 Hb_010863_080 Hb_000124_020--Hb_010863_080 Hb_000179_210 Hb_000179_210 Hb_000124_020--Hb_000179_210 Hb_000116_470 Hb_000116_470 Hb_000124_020--Hb_000116_470 Hb_005147_090 Hb_005147_090 Hb_000124_020--Hb_005147_090 Hb_000622_310--Hb_010863_080 Hb_000186_240 Hb_000186_240 Hb_000622_310--Hb_000186_240 Hb_000592_050 Hb_000592_050 Hb_000622_310--Hb_000592_050 Hb_000172_400 Hb_000172_400 Hb_000622_310--Hb_000172_400 Hb_000622_310--Hb_000179_210 Hb_000056_100--Hb_010863_080 Hb_000500_040 Hb_000500_040 Hb_000056_100--Hb_000500_040 Hb_002890_280 Hb_002890_280 Hb_000056_100--Hb_002890_280 Hb_000856_340 Hb_000856_340 Hb_000056_100--Hb_000856_340 Hb_003861_080 Hb_003861_080 Hb_000056_100--Hb_003861_080 Hb_003297_030 Hb_003297_030 Hb_010863_080--Hb_003297_030 Hb_000417_180 Hb_000417_180 Hb_010863_080--Hb_000417_180 Hb_000155_190 Hb_000155_190 Hb_010863_080--Hb_000155_190 Hb_168707_030 Hb_168707_030 Hb_010863_080--Hb_168707_030 Hb_010863_080--Hb_000179_210 Hb_004195_160 Hb_004195_160 Hb_010863_080--Hb_004195_160 Hb_006501_040 Hb_006501_040 Hb_000179_210--Hb_006501_040 Hb_178968_110 Hb_178968_110 Hb_000179_210--Hb_178968_110 Hb_001085_170 Hb_001085_170 Hb_000179_210--Hb_001085_170 Hb_000059_220 Hb_000059_220 Hb_000179_210--Hb_000059_220 Hb_000457_150 Hb_000457_150 Hb_000179_210--Hb_000457_150 Hb_000179_210--Hb_003297_030 Hb_021068_050 Hb_021068_050 Hb_000116_470--Hb_021068_050 Hb_003151_050 Hb_003151_050 Hb_000116_470--Hb_003151_050 Hb_000091_090 Hb_000091_090 Hb_000116_470--Hb_000091_090 Hb_000376_050 Hb_000376_050 Hb_000116_470--Hb_000376_050 Hb_002411_200 Hb_002411_200 Hb_000116_470--Hb_002411_200 Hb_001123_230 Hb_001123_230 Hb_005147_090--Hb_001123_230 Hb_005147_090--Hb_000457_150 Hb_018790_060 Hb_018790_060 Hb_005147_090--Hb_018790_060 Hb_000297_200 Hb_000297_200 Hb_005147_090--Hb_000297_200 Hb_003750_080 Hb_003750_080 Hb_005147_090--Hb_003750_080 Hb_000200_340 Hb_000200_340 Hb_005147_090--Hb_000200_340
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
26.9454 13.9621 2.53278 9.00268 25.6716 22.9359
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
20.1999 29.7482 40.1479 6.28216 1.19689

CAGE analysis