Hb_048116_010

Information

Type -
Description -
Location Contig48116: 17-472
Sequence    

Annotation

kegg
ID rcu:RCOM_0919160
description protein binding protein, putative
nr
ID XP_012076350.1
description PREDICTED: exocyst complex component EXO70A1 [Jatropha curcas]
swissprot
ID Q9LZD3
description Exocyst complex component EXO70A1 OS=Arabidopsis thaliana GN=EXO70A1 PE=1 SV=1
trembl
ID A0A067KB50
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07027 PE=4 SV=1
Gene Ontology
ID GO:0000145
description exocyst complex component exo70a1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_44748: 640-906
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_048116_010 0.0 - - PREDICTED: exocyst complex component EXO70A1 [Jatropha curcas]
2 Hb_001476_140 0.1194917464 - - PREDICTED: uncharacterized protein LOC105630497 [Jatropha curcas]
3 Hb_003988_010 0.1550936885 - - PREDICTED: vacuolar-sorting receptor 3 [Jatropha curcas]
4 Hb_000031_150 0.1559550069 - - PREDICTED: exocyst complex component EXO70A1 [Jatropha curcas]
5 Hb_004137_060 0.1604500931 - - PREDICTED: pentatricopeptide repeat-containing protein At3g09040, mitochondrial [Jatropha curcas]
6 Hb_010417_050 0.1641207499 - - PREDICTED: uncharacterized protein LOC105645746 [Jatropha curcas]
7 Hb_189118_010 0.165104644 - - PREDICTED: extended synaptotagmin-1 [Cucumis melo]
8 Hb_000442_080 0.1652054564 - - hypothetical protein JCGZ_03373 [Jatropha curcas]
9 Hb_001691_120 0.167446424 desease resistance Gene Name: AAA PREDICTED: vesicle-fusing ATPase [Jatropha curcas]
10 Hb_010427_010 0.1693704564 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_06191 [Jatropha curcas]
11 Hb_034271_030 0.1711935191 - - PREDICTED: pentatricopeptide repeat-containing protein At3g49170, chloroplastic [Jatropha curcas]
12 Hb_002811_060 0.172232445 - - PREDICTED: protein transport protein Sec24-like At4g32640 [Jatropha curcas]
13 Hb_000832_020 0.1733140997 transcription factor TF Family: B3 hypothetical protein EUGRSUZ_D00268 [Eucalyptus grandis]
14 Hb_001623_510 0.1756432341 - - transporter, putative [Ricinus communis]
15 Hb_000544_050 0.1757219226 - - PREDICTED: serine/threonine-protein kinase EDR1 [Jatropha curcas]
16 Hb_000739_220 0.1776653851 - - PREDICTED: brefeldin A-inhibited guanine nucleotide-exchange protein 2-like [Jatropha curcas]
17 Hb_073452_010 0.1784333098 - - PREDICTED: chaperonin CPN60-like 2, mitochondrial isoform X2 [Jatropha curcas]
18 Hb_000261_350 0.1786246178 - - PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 isoform X1 [Jatropha curcas]
19 Hb_002299_060 0.1787819127 transcription factor TF Family: FAR1 PREDICTED: probable receptor-like protein kinase At2g39360 [Jatropha curcas]
20 Hb_000032_100 0.1788878278 - - PREDICTED: hydroquinone glucosyltransferase [Vitis vinifera]

Gene co-expression network

sample Hb_048116_010 Hb_048116_010 Hb_001476_140 Hb_001476_140 Hb_048116_010--Hb_001476_140 Hb_003988_010 Hb_003988_010 Hb_048116_010--Hb_003988_010 Hb_000031_150 Hb_000031_150 Hb_048116_010--Hb_000031_150 Hb_004137_060 Hb_004137_060 Hb_048116_010--Hb_004137_060 Hb_010417_050 Hb_010417_050 Hb_048116_010--Hb_010417_050 Hb_189118_010 Hb_189118_010 Hb_048116_010--Hb_189118_010 Hb_001476_140--Hb_189118_010 Hb_007192_080 Hb_007192_080 Hb_001476_140--Hb_007192_080 Hb_008511_050 Hb_008511_050 Hb_001476_140--Hb_008511_050 Hb_028639_010 Hb_028639_010 Hb_001476_140--Hb_028639_010 Hb_003195_060 Hb_003195_060 Hb_001476_140--Hb_003195_060 Hb_003988_010--Hb_010417_050 Hb_002811_060 Hb_002811_060 Hb_003988_010--Hb_002811_060 Hb_000116_500 Hb_000116_500 Hb_003988_010--Hb_000116_500 Hb_003605_110 Hb_003605_110 Hb_003988_010--Hb_003605_110 Hb_004228_010 Hb_004228_010 Hb_003988_010--Hb_004228_010 Hb_002053_080 Hb_002053_080 Hb_003988_010--Hb_002053_080 Hb_000031_150--Hb_002811_060 Hb_000933_060 Hb_000933_060 Hb_000031_150--Hb_000933_060 Hb_001047_030 Hb_001047_030 Hb_000031_150--Hb_001047_030 Hb_004306_080 Hb_004306_080 Hb_000031_150--Hb_004306_080 Hb_003050_390 Hb_003050_390 Hb_000031_150--Hb_003050_390 Hb_001691_120 Hb_001691_120 Hb_000031_150--Hb_001691_120 Hb_004137_060--Hb_010417_050 Hb_000009_210 Hb_000009_210 Hb_004137_060--Hb_000009_210 Hb_014267_010 Hb_014267_010 Hb_004137_060--Hb_014267_010 Hb_000390_070 Hb_000390_070 Hb_004137_060--Hb_000390_070 Hb_000574_070 Hb_000574_070 Hb_004137_060--Hb_000574_070 Hb_000244_160 Hb_000244_160 Hb_004137_060--Hb_000244_160 Hb_010417_050--Hb_014267_010 Hb_010417_050--Hb_004228_010 Hb_001199_100 Hb_001199_100 Hb_010417_050--Hb_001199_100 Hb_000101_240 Hb_000101_240 Hb_010417_050--Hb_000101_240 Hb_001700_040 Hb_001700_040 Hb_010417_050--Hb_001700_040 Hb_000086_590 Hb_000086_590 Hb_189118_010--Hb_000086_590 Hb_010710_010 Hb_010710_010 Hb_189118_010--Hb_010710_010 Hb_005399_010 Hb_005399_010 Hb_189118_010--Hb_005399_010 Hb_034271_030 Hb_034271_030 Hb_189118_010--Hb_034271_030 Hb_049675_010 Hb_049675_010 Hb_189118_010--Hb_049675_010 Hb_000230_080 Hb_000230_080 Hb_189118_010--Hb_000230_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.21165 2.3472 0.376375 4.1043 5.73249 9.1469
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.7252 1.35513 8.79092 3.4137 2.9277

CAGE analysis