Hb_003605_110

Information

Type -
Description -
Location Contig3605: 83942-94723
Sequence    

Annotation

kegg
ID pop:POPTR_0013s12070g
description hypothetical protein
nr
ID XP_012075906.1
description PREDICTED: putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1D isoform X1 [Jatropha curcas]
swissprot
ID Q9XID0
description Putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1D OS=Arabidopsis thaliana GN=FAB1D PE=3 SV=1
trembl
ID A0A067KI51
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11021 PE=4 SV=1
Gene Ontology
ID GO:0005524
description 1-phosphatidylinositol-3-phosphate 5-kinase fab1d

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_37135: 85309-87787 , PASA_asmbl_37136: 87871-88724 , PASA_asmbl_37138: 90059-91551 , PASA_asmbl_37140: 92951-94684
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003605_110 0.0 - - PREDICTED: putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1D isoform X1 [Jatropha curcas]
2 Hb_000028_280 0.0668438927 transcription factor TF Family: NF-X1 PREDICTED: NF-X1-type zinc finger protein NFXL1 [Jatropha curcas]
3 Hb_002740_110 0.0695247513 - - PREDICTED: phytochrome A [Jatropha curcas]
4 Hb_005065_010 0.0777354833 - - PREDICTED: probable E3 ubiquitin-protein ligase ARI11 [Jatropha curcas]
5 Hb_003253_040 0.079306029 - - PREDICTED: uncharacterized protein At5g41620 [Jatropha curcas]
6 Hb_000343_120 0.080179353 - - PREDICTED: pentatricopeptide repeat-containing protein At3g16010 [Jatropha curcas]
7 Hb_009545_100 0.0805897338 - - PREDICTED: protein OBERON 1 [Jatropha curcas]
8 Hb_003988_010 0.0809995134 - - PREDICTED: vacuolar-sorting receptor 3 [Jatropha curcas]
9 Hb_002740_180 0.0813870328 - - conserved hypothetical protein [Ricinus communis]
10 Hb_002053_080 0.083300052 - - PREDICTED: pentatricopeptide repeat-containing protein At4g21300 [Jatropha curcas]
11 Hb_000796_030 0.0833946151 - - PREDICTED: pentatricopeptide repeat-containing protein At4g32450, mitochondrial-like [Jatropha curcas]
12 Hb_010417_050 0.0836930062 - - PREDICTED: uncharacterized protein LOC105645746 [Jatropha curcas]
13 Hb_000796_040 0.0845652995 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
14 Hb_014267_010 0.0864304394 - - PREDICTED: dnaJ homolog subfamily C GRV2 isoform X1 [Jatropha curcas]
15 Hb_002025_020 0.0872493516 - - PREDICTED: pentatricopeptide repeat-containing protein At5g39710 [Jatropha curcas]
16 Hb_012022_090 0.0876006681 - - PREDICTED: LIMR family protein At5g01460 [Gossypium raimondii]
17 Hb_001199_100 0.0880912237 - - PREDICTED: uncharacterized protein LOC105639813 [Jatropha curcas]
18 Hb_000739_310 0.0885824468 - - PREDICTED: uncharacterized protein LOC105643091 isoform X1 [Jatropha curcas]
19 Hb_003029_110 0.0887137393 - - PREDICTED: uncharacterized protein LOC105640062 isoform X1 [Jatropha curcas]
20 Hb_021297_050 0.0890080762 - - PREDICTED: signal recognition particle receptor subunit alpha [Jatropha curcas]

Gene co-expression network

sample Hb_003605_110 Hb_003605_110 Hb_000028_280 Hb_000028_280 Hb_003605_110--Hb_000028_280 Hb_002740_110 Hb_002740_110 Hb_003605_110--Hb_002740_110 Hb_005065_010 Hb_005065_010 Hb_003605_110--Hb_005065_010 Hb_003253_040 Hb_003253_040 Hb_003605_110--Hb_003253_040 Hb_000343_120 Hb_000343_120 Hb_003605_110--Hb_000343_120 Hb_009545_100 Hb_009545_100 Hb_003605_110--Hb_009545_100 Hb_000028_280--Hb_000343_120 Hb_000028_280--Hb_002740_110 Hb_004143_130 Hb_004143_130 Hb_000028_280--Hb_004143_130 Hb_000028_280--Hb_003253_040 Hb_004994_220 Hb_004994_220 Hb_000028_280--Hb_004994_220 Hb_002740_110--Hb_003253_040 Hb_010174_110 Hb_010174_110 Hb_002740_110--Hb_010174_110 Hb_002740_110--Hb_004994_220 Hb_004032_380 Hb_004032_380 Hb_002740_110--Hb_004032_380 Hb_002740_110--Hb_004143_130 Hb_005065_010--Hb_009545_100 Hb_012022_090 Hb_012022_090 Hb_005065_010--Hb_012022_090 Hb_000116_500 Hb_000116_500 Hb_005065_010--Hb_000116_500 Hb_001143_160 Hb_001143_160 Hb_005065_010--Hb_001143_160 Hb_021297_050 Hb_021297_050 Hb_005065_010--Hb_021297_050 Hb_003253_040--Hb_010174_110 Hb_001199_100 Hb_001199_100 Hb_003253_040--Hb_001199_100 Hb_002942_100 Hb_002942_100 Hb_003253_040--Hb_002942_100 Hb_002063_020 Hb_002063_020 Hb_003253_040--Hb_002063_020 Hb_003253_040--Hb_004143_130 Hb_000166_130 Hb_000166_130 Hb_000343_120--Hb_000166_130 Hb_000035_290 Hb_000035_290 Hb_000343_120--Hb_000035_290 Hb_000343_120--Hb_009545_100 Hb_000343_120--Hb_001199_100 Hb_003029_110 Hb_003029_110 Hb_000343_120--Hb_003029_110 Hb_002025_020 Hb_002025_020 Hb_009545_100--Hb_002025_020 Hb_000347_070 Hb_000347_070 Hb_009545_100--Hb_000347_070 Hb_009545_100--Hb_000116_500 Hb_009545_100--Hb_003029_110 Hb_000225_040 Hb_000225_040 Hb_009545_100--Hb_000225_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
6.0384 8.87405 3.94216 6.85624 14.8674 11.9793
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
7.62688 6.26971 12.4221 9.74591 10.3626

CAGE analysis