Hb_007192_080

Information

Type -
Description -
Location Contig7192: 45890-50646
Sequence    

Annotation

kegg
ID rcu:RCOM_1508480
description kinase, putative (EC:2.7.11.25)
nr
ID XP_012079970.1
description PREDICTED: probable serine/threonine-protein kinase WNK3 isoform X2 [Jatropha curcas]
swissprot
ID Q65X23
description Probable serine/threonine-protein kinase WNK2 OS=Oryza sativa subsp. japonica GN=WNK2 PE=2 SV=1
trembl
ID A0A067K470
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11397 PE=4 SV=1
Gene Ontology
ID GO:0005622
description probable serine threonine-protein kinase wnk3 isoform x2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_55548: 46856-49111 , PASA_asmbl_55549: 49533-50438
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007192_080 0.0 - - PREDICTED: probable serine/threonine-protein kinase WNK3 isoform X2 [Jatropha curcas]
2 Hb_003195_060 0.0795977463 - - PREDICTED: transmembrane protein 184 homolog DDB_G0279555 [Jatropha curcas]
3 Hb_001866_110 0.0805542396 - - PREDICTED: trihelix transcription factor GT-3b-like [Jatropha curcas]
4 Hb_009535_020 0.0814463638 - - PREDICTED: V-type proton ATPase subunit a3-like [Jatropha curcas]
5 Hb_008511_050 0.0815842646 - - PREDICTED: cyclase-associated protein 1 [Jatropha curcas]
6 Hb_002200_130 0.0824163088 - - PREDICTED: vacuolar protein sorting-associated protein 45 homolog [Jatropha curcas]
7 Hb_000014_150 0.0839844626 - - PREDICTED: cysteine--tRNA ligase, cytoplasmic-like [Jatropha curcas]
8 Hb_004117_130 0.0869817371 - - PREDICTED: uncharacterized protein LOC105649104 [Jatropha curcas]
9 Hb_023344_030 0.0906527041 - - PREDICTED: putative G3BP-like protein [Jatropha curcas]
10 Hb_028639_010 0.092731266 - - transporter, putative [Ricinus communis]
11 Hb_000207_390 0.0948792831 - - PREDICTED: uncharacterized protein LOC105637143 [Jatropha curcas]
12 Hb_000048_140 0.0949229754 - - PREDICTED: eukaryotic peptide chain release factor GTP-binding subunit ERF3A isoform X3 [Jatropha curcas]
13 Hb_000608_030 0.0950586356 - - hypothetical protein JCGZ_18019 [Jatropha curcas]
14 Hb_000384_090 0.096384394 - - PREDICTED: probable VAMP-like protein At1g33475 [Jatropha curcas]
15 Hb_000103_180 0.0967709911 - - PREDICTED: stress-induced-phosphoprotein 1 [Jatropha curcas]
16 Hb_000059_150 0.0977849508 - - Polynucleotidyl transferase, ribonuclease H-like superfamily protein isoform 2 [Theobroma cacao]
17 Hb_000679_150 0.0988985219 - - PREDICTED: DEAD-box ATP-dependent RNA helicase 56 isoform X2 [Fragaria vesca subsp. vesca]
18 Hb_000933_090 0.0989977253 - - PREDICTED: probable protein S-acyltransferase 22 [Jatropha curcas]
19 Hb_000358_150 0.0993176 - - hypothetical protein VITISV_012309 [Vitis vinifera]
20 Hb_144598_030 0.0999228605 - - PREDICTED: mitotic apparatus protein p62 [Jatropha curcas]

Gene co-expression network

sample Hb_007192_080 Hb_007192_080 Hb_003195_060 Hb_003195_060 Hb_007192_080--Hb_003195_060 Hb_001866_110 Hb_001866_110 Hb_007192_080--Hb_001866_110 Hb_009535_020 Hb_009535_020 Hb_007192_080--Hb_009535_020 Hb_008511_050 Hb_008511_050 Hb_007192_080--Hb_008511_050 Hb_002200_130 Hb_002200_130 Hb_007192_080--Hb_002200_130 Hb_000014_150 Hb_000014_150 Hb_007192_080--Hb_000014_150 Hb_003195_060--Hb_008511_050 Hb_002609_110 Hb_002609_110 Hb_003195_060--Hb_002609_110 Hb_003195_070 Hb_003195_070 Hb_003195_060--Hb_003195_070 Hb_002811_360 Hb_002811_360 Hb_003195_060--Hb_002811_360 Hb_006332_010 Hb_006332_010 Hb_003195_060--Hb_006332_010 Hb_005754_060 Hb_005754_060 Hb_003195_060--Hb_005754_060 Hb_000429_120 Hb_000429_120 Hb_001866_110--Hb_000429_120 Hb_005977_090 Hb_005977_090 Hb_001866_110--Hb_005977_090 Hb_000179_020 Hb_000179_020 Hb_001866_110--Hb_000179_020 Hb_002174_060 Hb_002174_060 Hb_001866_110--Hb_002174_060 Hb_003428_070 Hb_003428_070 Hb_001866_110--Hb_003428_070 Hb_000889_020 Hb_000889_020 Hb_001866_110--Hb_000889_020 Hb_000600_070 Hb_000600_070 Hb_009535_020--Hb_000600_070 Hb_000023_190 Hb_000023_190 Hb_009535_020--Hb_000023_190 Hb_028487_110 Hb_028487_110 Hb_009535_020--Hb_028487_110 Hb_028639_010 Hb_028639_010 Hb_009535_020--Hb_028639_010 Hb_004218_240 Hb_004218_240 Hb_009535_020--Hb_004218_240 Hb_000567_050 Hb_000567_050 Hb_009535_020--Hb_000567_050 Hb_008511_050--Hb_006332_010 Hb_008511_050--Hb_002200_130 Hb_050455_010 Hb_050455_010 Hb_008511_050--Hb_050455_010 Hb_023344_030 Hb_023344_030 Hb_008511_050--Hb_023344_030 Hb_000207_390 Hb_000207_390 Hb_002200_130--Hb_000207_390 Hb_003362_040 Hb_003362_040 Hb_002200_130--Hb_003362_040 Hb_001301_200 Hb_001301_200 Hb_002200_130--Hb_001301_200 Hb_000048_140 Hb_000048_140 Hb_002200_130--Hb_000048_140 Hb_002200_130--Hb_028639_010 Hb_001797_050 Hb_001797_050 Hb_002200_130--Hb_001797_050 Hb_000014_150--Hb_001866_110 Hb_000608_030 Hb_000608_030 Hb_000014_150--Hb_000608_030 Hb_004117_130 Hb_004117_130 Hb_000014_150--Hb_004117_130 Hb_001623_510 Hb_001623_510 Hb_000014_150--Hb_001623_510 Hb_000384_090 Hb_000384_090 Hb_000014_150--Hb_000384_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
9.3711 5.97177 3.81222 9.07698 18.8064 25.932
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
11.4807 8.2229 13.2846 8.28362 7.04653

CAGE analysis