Hb_000959_180

Information

Type -
Description -
Location Contig959: 161929-162198
Sequence    

Annotation

kegg
ID rcu:RCOM_0075660
description hypothetical protein
nr
ID KDP35289.1
description hypothetical protein JCGZ_09448 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KTY3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09448 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000959_180 0.0 - - hypothetical protein JCGZ_09448 [Jatropha curcas]
2 Hb_005356_050 0.1912038017 - - PREDICTED: bidirectional sugar transporter N3 [Jatropha curcas]
3 Hb_108216_030 0.1944143954 - - Xylem serine proteinase 1 precursor, putative [Ricinus communis]
4 Hb_000723_210 0.2000972034 - - Indole-3-acetic acid-induced protein ARG7, putative [Ricinus communis]
5 Hb_000365_040 0.2133456185 - - PREDICTED: uncharacterized protein LOC105649097 [Jatropha curcas]
6 Hb_000245_070 0.2147479481 - - PREDICTED: uncharacterized protein LOC105141276 [Populus euphratica]
7 Hb_001247_080 0.2167611314 - - conserved hypothetical protein [Ricinus communis]
8 Hb_000343_170 0.2207042994 - - PREDICTED: probable sulfate transporter 3.4 [Jatropha curcas]
9 Hb_000302_110 0.2208099637 - - UDP-glucosyltransferase, putative [Ricinus communis]
10 Hb_156850_040 0.2232075274 - - PREDICTED: uncharacterized protein LOC105635251 [Jatropha curcas]
11 Hb_000638_110 0.2266529226 transcription factor TF Family: NAC hypothetical protein POPTR_0007s04250g [Populus trichocarpa]
12 Hb_000566_090 0.2288172174 - - conserved hypothetical protein [Ricinus communis]
13 Hb_001584_040 0.2304198806 - - PREDICTED: uncharacterized protein LOC105125166 [Populus euphratica]
14 Hb_005183_020 0.2325706825 - - hypothetical protein JCGZ_04285 [Jatropha curcas]
15 Hb_045786_010 0.2331915008 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
16 Hb_004925_030 0.2333439057 - - EXORDIUM like 1 [Theobroma cacao]
17 Hb_000628_100 0.2334065635 - - hypothetical protein MTR_1g019660 [Medicago truncatula]
18 Hb_024066_030 0.2334491202 - - PREDICTED: beta-glucosidase 24-like [Jatropha curcas]
19 Hb_002835_120 0.234264938 - - PREDICTED: uncharacterized protein LOC105640304 [Jatropha curcas]
20 Hb_000035_510 0.237509499 - - PREDICTED: protein GLUTAMINE DUMPER 5-like [Jatropha curcas]

Gene co-expression network

sample Hb_000959_180 Hb_000959_180 Hb_005356_050 Hb_005356_050 Hb_000959_180--Hb_005356_050 Hb_108216_030 Hb_108216_030 Hb_000959_180--Hb_108216_030 Hb_000723_210 Hb_000723_210 Hb_000959_180--Hb_000723_210 Hb_000365_040 Hb_000365_040 Hb_000959_180--Hb_000365_040 Hb_000245_070 Hb_000245_070 Hb_000959_180--Hb_000245_070 Hb_001247_080 Hb_001247_080 Hb_000959_180--Hb_001247_080 Hb_005183_020 Hb_005183_020 Hb_005356_050--Hb_005183_020 Hb_002320_050 Hb_002320_050 Hb_005356_050--Hb_002320_050 Hb_001396_080 Hb_001396_080 Hb_005356_050--Hb_001396_080 Hb_011930_090 Hb_011930_090 Hb_005356_050--Hb_011930_090 Hb_006061_020 Hb_006061_020 Hb_005356_050--Hb_006061_020 Hb_000710_130 Hb_000710_130 Hb_005356_050--Hb_000710_130 Hb_108216_030--Hb_000365_040 Hb_003952_080 Hb_003952_080 Hb_108216_030--Hb_003952_080 Hb_156850_040 Hb_156850_040 Hb_108216_030--Hb_156850_040 Hb_009851_040 Hb_009851_040 Hb_108216_030--Hb_009851_040 Hb_001269_570 Hb_001269_570 Hb_108216_030--Hb_001269_570 Hb_108216_030--Hb_001247_080 Hb_000566_090 Hb_000566_090 Hb_000723_210--Hb_000566_090 Hb_000035_510 Hb_000035_510 Hb_000723_210--Hb_000035_510 Hb_000628_100 Hb_000628_100 Hb_000723_210--Hb_000628_100 Hb_000172_260 Hb_000172_260 Hb_000723_210--Hb_000172_260 Hb_174644_010 Hb_174644_010 Hb_000723_210--Hb_174644_010 Hb_005396_030 Hb_005396_030 Hb_000365_040--Hb_005396_030 Hb_000733_090 Hb_000733_090 Hb_000365_040--Hb_000733_090 Hb_000365_040--Hb_001247_080 Hb_000860_030 Hb_000860_030 Hb_000365_040--Hb_000860_030 Hb_111985_090 Hb_111985_090 Hb_000365_040--Hb_111985_090 Hb_004757_040 Hb_004757_040 Hb_000245_070--Hb_004757_040 Hb_000007_020 Hb_000007_020 Hb_000245_070--Hb_000007_020 Hb_001269_440 Hb_001269_440 Hb_000245_070--Hb_001269_440 Hb_002835_120 Hb_002835_120 Hb_000245_070--Hb_002835_120 Hb_006590_040 Hb_006590_040 Hb_000245_070--Hb_006590_040 Hb_008200_010 Hb_008200_010 Hb_000245_070--Hb_008200_010 Hb_001584_040 Hb_001584_040 Hb_001247_080--Hb_001584_040 Hb_001247_080--Hb_000245_070 Hb_001247_080--Hb_004757_040 Hb_001247_080--Hb_002835_120
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.37322 9.3549 0.60816 45.6839 1.03602 1.8105
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 3.15251 0.183394 1.133

CAGE analysis