Hb_001584_040

Information

Type -
Description -
Location Contig1584: 32956-33342
Sequence    

Annotation

kegg
ID tcc:TCM_026777
description hypothetical protein
nr
ID XP_011023794.1
description PREDICTED: uncharacterized protein LOC105125166 [Populus euphratica]
swissprot
ID -
description -
trembl
ID A0A067JHH4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23229 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001584_040 0.0 - - PREDICTED: uncharacterized protein LOC105125166 [Populus euphratica]
2 Hb_001247_080 0.1093424669 - - conserved hypothetical protein [Ricinus communis]
3 Hb_002820_100 0.1547282911 - - hypothetical protein OsI_33031 [Oryza sativa Indica Group]
4 Hb_000245_070 0.1662890501 - - PREDICTED: uncharacterized protein LOC105141276 [Populus euphratica]
5 Hb_009466_040 0.1671589226 - - hypothetical protein POPTR_0002s10890g [Populus trichocarpa]
6 Hb_001147_120 0.1691849362 - - hypothetical protein JCGZ_14802 [Jatropha curcas]
7 Hb_001825_030 0.1692776205 transcription factor TF Family: C2H2 PREDICTED: transcriptional regulator SUPERMAN [Jatropha curcas]
8 Hb_000284_090 0.1693010766 desease resistance Gene Name: NB-ARC PREDICTED: TMV resistance protein N-like [Jatropha curcas]
9 Hb_000321_020 0.1701225518 - - PREDICTED: uncharacterized protein LOC104891638 [Beta vulgaris subsp. vulgaris]
10 Hb_177587_010 0.170573535 - - PREDICTED: putative amidase C869.01 [Jatropha curcas]
11 Hb_002304_120 0.1708653095 - - conserved hypothetical protein [Ricinus communis]
12 Hb_000035_510 0.1711321417 - - PREDICTED: protein GLUTAMINE DUMPER 5-like [Jatropha curcas]
13 Hb_012760_080 0.1716808322 - - conserved hypothetical protein [Ricinus communis]
14 Hb_000327_050 0.172031565 - - PREDICTED: protein NRT1/ PTR FAMILY 2.7-like isoform X1 [Populus euphratica]
15 Hb_000334_040 0.1723146412 - - hypothetical protein POPTR_0001s41860g [Populus trichocarpa]
16 Hb_013399_040 0.1733181068 - - hypothetical protein JCGZ_24713 [Jatropha curcas]
17 Hb_058095_010 0.1742301534 - - PREDICTED: uncharacterized protein LOC105109431 [Populus euphratica]
18 Hb_170674_020 0.175396349 - - hypothetical protein JCGZ_23768 [Jatropha curcas]
19 Hb_004148_030 0.1756826037 - - PREDICTED: protein RAFTIN 1B-like [Gossypium raimondii]
20 Hb_005183_020 0.175821593 - - hypothetical protein JCGZ_04285 [Jatropha curcas]

Gene co-expression network

sample Hb_001584_040 Hb_001584_040 Hb_001247_080 Hb_001247_080 Hb_001584_040--Hb_001247_080 Hb_002820_100 Hb_002820_100 Hb_001584_040--Hb_002820_100 Hb_000245_070 Hb_000245_070 Hb_001584_040--Hb_000245_070 Hb_009466_040 Hb_009466_040 Hb_001584_040--Hb_009466_040 Hb_001147_120 Hb_001147_120 Hb_001584_040--Hb_001147_120 Hb_001825_030 Hb_001825_030 Hb_001584_040--Hb_001825_030 Hb_001247_080--Hb_000245_070 Hb_004757_040 Hb_004757_040 Hb_001247_080--Hb_004757_040 Hb_000365_040 Hb_000365_040 Hb_001247_080--Hb_000365_040 Hb_002835_120 Hb_002835_120 Hb_001247_080--Hb_002835_120 Hb_108216_030 Hb_108216_030 Hb_001247_080--Hb_108216_030 Hb_007472_060 Hb_007472_060 Hb_002820_100--Hb_007472_060 Hb_125152_010 Hb_125152_010 Hb_002820_100--Hb_125152_010 Hb_009501_010 Hb_009501_010 Hb_002820_100--Hb_009501_010 Hb_000048_120 Hb_000048_120 Hb_002820_100--Hb_000048_120 Hb_005463_120 Hb_005463_120 Hb_002820_100--Hb_005463_120 Hb_001998_160 Hb_001998_160 Hb_002820_100--Hb_001998_160 Hb_000245_070--Hb_004757_040 Hb_000007_020 Hb_000007_020 Hb_000245_070--Hb_000007_020 Hb_001269_440 Hb_001269_440 Hb_000245_070--Hb_001269_440 Hb_000245_070--Hb_002835_120 Hb_006590_040 Hb_006590_040 Hb_000245_070--Hb_006590_040 Hb_008200_010 Hb_008200_010 Hb_000245_070--Hb_008200_010 Hb_000334_040 Hb_000334_040 Hb_009466_040--Hb_000334_040 Hb_177587_010 Hb_177587_010 Hb_009466_040--Hb_177587_010 Hb_050229_030 Hb_050229_030 Hb_009466_040--Hb_050229_030 Hb_000976_090 Hb_000976_090 Hb_009466_040--Hb_000976_090 Hb_002053_070 Hb_002053_070 Hb_009466_040--Hb_002053_070 Hb_001645_100 Hb_001645_100 Hb_009466_040--Hb_001645_100 Hb_001147_120--Hb_001825_030 Hb_000284_090 Hb_000284_090 Hb_001147_120--Hb_000284_090 Hb_000321_020 Hb_000321_020 Hb_001147_120--Hb_000321_020 Hb_002304_120 Hb_002304_120 Hb_001147_120--Hb_002304_120 Hb_012760_080 Hb_012760_080 Hb_001147_120--Hb_012760_080 Hb_000327_050 Hb_000327_050 Hb_001147_120--Hb_000327_050 Hb_001825_030--Hb_000284_090 Hb_001825_030--Hb_012760_080 Hb_001825_030--Hb_000321_020 Hb_001825_030--Hb_002304_120 Hb_058095_010 Hb_058095_010 Hb_001825_030--Hb_058095_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 2.15738 0 10.8195 0.344084 0.282738
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.144039 0

CAGE analysis