Hb_002820_100

Information

Type -
Description -
Location Contig2820: 73506-73727
Sequence    

Annotation

kegg
ID dosa:Os01t0296900-01
description Os01g0296900; Hypothetical conserved gene.
nr
ID EEC66708.1
description hypothetical protein OsI_33031 [Oryza sativa Indica Group]
swissprot
ID -
description -
trembl
ID B9G7Z2
description Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_31033 PE=4 SV=1
Gene Ontology
ID GO:0016021
description wat1-related protein at4g08290-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002820_100 0.0 - - hypothetical protein OsI_33031 [Oryza sativa Indica Group]
2 Hb_007472_060 0.0983381757 - - PREDICTED: ABC transporter G family member 14-like isoform X1 [Jatropha curcas]
3 Hb_125152_010 0.1016436848 - - Ankyrin repeat family protein, putative [Theobroma cacao]
4 Hb_009501_010 0.1018369753 - - Disease resistance protein RPS5, putative [Ricinus communis]
5 Hb_000048_120 0.1018935082 - - PREDICTED: probable S-adenosylmethionine-dependent methyltransferase At5g37970 [Jatropha curcas]
6 Hb_005463_120 0.1033657874 - - gibberellin 20-oxidase, putative [Ricinus communis]
7 Hb_001998_160 0.10757745 - - PREDICTED: origin recognition complex subunit 1-like [Populus euphratica]
8 Hb_000629_140 0.1090575495 - - hypothetical protein SORBIDRAFT_04g013083 [Sorghum bicolor]
9 Hb_000318_070 0.1145884292 - - PREDICTED: peroxidase 10-like [Jatropha curcas]
10 Hb_002217_480 0.1151893513 - - PREDICTED: uncharacterized protein LOC105115446 [Populus euphratica]
11 Hb_137821_010 0.1155619809 - - hypothetical protein CISIN_1g034189mg [Citrus sinensis]
12 Hb_170674_020 0.1174914002 - - hypothetical protein JCGZ_23768 [Jatropha curcas]
13 Hb_013399_040 0.122267121 - - hypothetical protein JCGZ_24713 [Jatropha curcas]
14 Hb_000327_050 0.1260993037 - - PREDICTED: protein NRT1/ PTR FAMILY 2.7-like isoform X1 [Populus euphratica]
15 Hb_002853_010 0.1286902955 - - conserved hypothetical protein [Ricinus communis]
16 Hb_000527_090 0.1303610943 - - serine carboxypeptidase, putative [Ricinus communis]
17 Hb_002304_120 0.1306437011 - - conserved hypothetical protein [Ricinus communis]
18 Hb_000086_160 0.1345094188 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 21/22 [Jatropha curcas]
19 Hb_000321_020 0.1346084302 - - PREDICTED: uncharacterized protein LOC104891638 [Beta vulgaris subsp. vulgaris]
20 Hb_177587_010 0.1360694678 - - PREDICTED: putative amidase C869.01 [Jatropha curcas]

Gene co-expression network

sample Hb_002820_100 Hb_002820_100 Hb_007472_060 Hb_007472_060 Hb_002820_100--Hb_007472_060 Hb_125152_010 Hb_125152_010 Hb_002820_100--Hb_125152_010 Hb_009501_010 Hb_009501_010 Hb_002820_100--Hb_009501_010 Hb_000048_120 Hb_000048_120 Hb_002820_100--Hb_000048_120 Hb_005463_120 Hb_005463_120 Hb_002820_100--Hb_005463_120 Hb_001998_160 Hb_001998_160 Hb_002820_100--Hb_001998_160 Hb_000527_090 Hb_000527_090 Hb_007472_060--Hb_000527_090 Hb_011689_090 Hb_011689_090 Hb_007472_060--Hb_011689_090 Hb_029508_050 Hb_029508_050 Hb_007472_060--Hb_029508_050 Hb_116679_010 Hb_116679_010 Hb_007472_060--Hb_116679_010 Hb_006452_080 Hb_006452_080 Hb_007472_060--Hb_006452_080 Hb_003607_040 Hb_003607_040 Hb_007472_060--Hb_003607_040 Hb_125152_010--Hb_000048_120 Hb_000629_140 Hb_000629_140 Hb_125152_010--Hb_000629_140 Hb_125152_010--Hb_009501_010 Hb_125152_010--Hb_001998_160 Hb_002217_480 Hb_002217_480 Hb_125152_010--Hb_002217_480 Hb_137821_010 Hb_137821_010 Hb_125152_010--Hb_137821_010 Hb_009501_010--Hb_001998_160 Hb_000318_070 Hb_000318_070 Hb_009501_010--Hb_000318_070 Hb_009501_010--Hb_000048_120 Hb_170674_020 Hb_170674_020 Hb_009501_010--Hb_170674_020 Hb_009501_010--Hb_002217_480 Hb_000048_120--Hb_000629_140 Hb_000048_120--Hb_001998_160 Hb_000048_120--Hb_137821_010 Hb_000048_120--Hb_002217_480 Hb_005463_120--Hb_137821_010 Hb_003747_080 Hb_003747_080 Hb_005463_120--Hb_003747_080 Hb_041067_010 Hb_041067_010 Hb_005463_120--Hb_041067_010 Hb_005463_120--Hb_000527_090 Hb_005463_120--Hb_002217_480 Hb_015085_010 Hb_015085_010 Hb_005463_120--Hb_015085_010 Hb_001998_160--Hb_000318_070 Hb_001998_160--Hb_170674_020 Hb_013399_040 Hb_013399_040 Hb_001998_160--Hb_013399_040 Hb_001998_160--Hb_002217_480 Hb_000327_050 Hb_000327_050 Hb_001998_160--Hb_000327_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 3.30988 0 36.798 0.455669 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.355996 0

CAGE analysis