Hb_170674_020

Information

Type -
Description -
Location Contig170674: 6544-8613
Sequence    

Annotation

kegg
ID pop:POPTR_0007s02210g
description hypothetical protein
nr
ID KDP42826.1
description hypothetical protein JCGZ_23768 [Jatropha curcas]
swissprot
ID D7SFH9
description Glycerophosphodiester phosphodiesterase protein kinase domain-containing GDPDL2 OS=Arabidopsis thaliana GN=GDPDL2 PE=1 SV=1
trembl
ID A0A067L2Z5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23768 PE=3 SV=1
Gene Ontology
ID GO:0004672
description probable receptor-like protein kinase at1g67000

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_170674_020 0.0 - - hypothetical protein JCGZ_23768 [Jatropha curcas]
2 Hb_000318_070 0.0057796243 - - PREDICTED: peroxidase 10-like [Jatropha curcas]
3 Hb_013399_040 0.0087639038 - - hypothetical protein JCGZ_24713 [Jatropha curcas]
4 Hb_000327_050 0.0153082078 - - PREDICTED: protein NRT1/ PTR FAMILY 2.7-like isoform X1 [Populus euphratica]
5 Hb_001998_160 0.0221748099 - - PREDICTED: origin recognition complex subunit 1-like [Populus euphratica]
6 Hb_002304_120 0.0226545721 - - conserved hypothetical protein [Ricinus communis]
7 Hb_000321_020 0.0287771151 - - PREDICTED: uncharacterized protein LOC104891638 [Beta vulgaris subsp. vulgaris]
8 Hb_002217_480 0.0365943741 - - PREDICTED: uncharacterized protein LOC105115446 [Populus euphratica]
9 Hb_009501_010 0.0425484632 - - Disease resistance protein RPS5, putative [Ricinus communis]
10 Hb_001147_120 0.0490427149 - - hypothetical protein JCGZ_14802 [Jatropha curcas]
11 Hb_004148_030 0.0502362232 - - PREDICTED: protein RAFTIN 1B-like [Gossypium raimondii]
12 Hb_001825_030 0.0530047798 transcription factor TF Family: C2H2 PREDICTED: transcriptional regulator SUPERMAN [Jatropha curcas]
13 Hb_000284_090 0.0536446918 desease resistance Gene Name: NB-ARC PREDICTED: TMV resistance protein N-like [Jatropha curcas]
14 Hb_012760_080 0.0765464291 - - conserved hypothetical protein [Ricinus communis]
15 Hb_041067_010 0.0773239339 - - hypothetical protein JCGZ_00780 [Jatropha curcas]
16 Hb_125152_010 0.0805183905 - - Ankyrin repeat family protein, putative [Theobroma cacao]
17 Hb_000048_120 0.0818371182 - - PREDICTED: probable S-adenosylmethionine-dependent methyltransferase At5g37970 [Jatropha curcas]
18 Hb_058095_010 0.0891113654 - - PREDICTED: uncharacterized protein LOC105109431 [Populus euphratica]
19 Hb_032280_010 0.0979488814 - - PREDICTED: probable receptor-like protein kinase At1g67000 isoform X1 [Jatropha curcas]
20 Hb_000629_140 0.1054105449 - - hypothetical protein SORBIDRAFT_04g013083 [Sorghum bicolor]

Gene co-expression network

sample Hb_170674_020 Hb_170674_020 Hb_000318_070 Hb_000318_070 Hb_170674_020--Hb_000318_070 Hb_013399_040 Hb_013399_040 Hb_170674_020--Hb_013399_040 Hb_000327_050 Hb_000327_050 Hb_170674_020--Hb_000327_050 Hb_001998_160 Hb_001998_160 Hb_170674_020--Hb_001998_160 Hb_002304_120 Hb_002304_120 Hb_170674_020--Hb_002304_120 Hb_000321_020 Hb_000321_020 Hb_170674_020--Hb_000321_020 Hb_000318_070--Hb_013399_040 Hb_000318_070--Hb_001998_160 Hb_000318_070--Hb_000327_050 Hb_000318_070--Hb_002304_120 Hb_000318_070--Hb_000321_020 Hb_013399_040--Hb_000327_050 Hb_013399_040--Hb_002304_120 Hb_013399_040--Hb_000321_020 Hb_013399_040--Hb_001998_160 Hb_000327_050--Hb_002304_120 Hb_000327_050--Hb_000321_020 Hb_001147_120 Hb_001147_120 Hb_000327_050--Hb_001147_120 Hb_009501_010 Hb_009501_010 Hb_001998_160--Hb_009501_010 Hb_002217_480 Hb_002217_480 Hb_001998_160--Hb_002217_480 Hb_001998_160--Hb_000327_050 Hb_002304_120--Hb_000321_020 Hb_002304_120--Hb_001147_120 Hb_000321_020--Hb_001147_120 Hb_001825_030 Hb_001825_030 Hb_000321_020--Hb_001825_030 Hb_000284_090 Hb_000284_090 Hb_000321_020--Hb_000284_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0144925 0 0.0994722 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis