Hb_000035_510

Information

Type -
Description -
Location Contig35: 475497-476030
Sequence    

Annotation

kegg
ID rcu:RCOM_0920050
description hypothetical protein
nr
ID XP_012076374.1
description PREDICTED: protein GLUTAMINE DUMPER 5-like [Jatropha curcas]
swissprot
ID Q9FHH5
description Protein GLUTAMINE DUMPER 3 OS=Arabidopsis thaliana GN=GDU3 PE=2 SV=1
trembl
ID A0A067KMF8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07046 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000035_510 0.0 - - PREDICTED: protein GLUTAMINE DUMPER 5-like [Jatropha curcas]
2 Hb_006052_080 0.0899619179 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH140-like [Populus euphratica]
3 Hb_001053_100 0.1211029308 - - DNA-damage-inducible protein f, putative [Ricinus communis]
4 Hb_103931_010 0.1218873226 - - -
5 Hb_005463_120 0.1222326927 - - gibberellin 20-oxidase, putative [Ricinus communis]
6 Hb_000027_010 0.1305013999 - - -
7 Hb_000628_100 0.1337742315 - - hypothetical protein MTR_1g019660 [Medicago truncatula]
8 Hb_000086_160 0.1358277418 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 21/22 [Jatropha curcas]
9 Hb_015085_010 0.1387991062 - - hypothetical protein POPTR_0018s11360g [Populus trichocarpa]
10 Hb_041067_010 0.1471705957 - - hypothetical protein JCGZ_00780 [Jatropha curcas]
11 Hb_001396_080 0.1493789716 - - conserved hypothetical protein [Ricinus communis]
12 Hb_010638_030 0.1517968208 - - oleosin1 [Plukenetia volubilis]
13 Hb_000164_250 0.1530069334 - - hypothetical protein CISIN_1g040645mg [Citrus sinensis]
14 Hb_006275_080 0.1539912851 - - PREDICTED: protein WALLS ARE THIN 1 [Jatropha curcas]
15 Hb_032280_010 0.1554210875 - - PREDICTED: probable receptor-like protein kinase At1g67000 isoform X1 [Jatropha curcas]
16 Hb_137821_010 0.1559750479 - - hypothetical protein CISIN_1g034189mg [Citrus sinensis]
17 Hb_000172_260 0.1563958087 - - PREDICTED: low affinity sulfate transporter 3 [Jatropha curcas]
18 Hb_002820_100 0.1577199564 - - hypothetical protein OsI_33031 [Oryza sativa Indica Group]
19 Hb_002025_190 0.159903336 - - PREDICTED: transcription factor bHLH111 [Jatropha curcas]
20 Hb_003777_100 0.1600284831 - - Auxin-induced protein 5NG4, putative [Ricinus communis]

Gene co-expression network

sample Hb_000035_510 Hb_000035_510 Hb_006052_080 Hb_006052_080 Hb_000035_510--Hb_006052_080 Hb_001053_100 Hb_001053_100 Hb_000035_510--Hb_001053_100 Hb_103931_010 Hb_103931_010 Hb_000035_510--Hb_103931_010 Hb_005463_120 Hb_005463_120 Hb_000035_510--Hb_005463_120 Hb_000027_010 Hb_000027_010 Hb_000035_510--Hb_000027_010 Hb_000628_100 Hb_000628_100 Hb_000035_510--Hb_000628_100 Hb_006052_080--Hb_000027_010 Hb_006052_080--Hb_005463_120 Hb_008727_090 Hb_008727_090 Hb_006052_080--Hb_008727_090 Hb_181191_010 Hb_181191_010 Hb_006052_080--Hb_181191_010 Hb_000203_120 Hb_000203_120 Hb_006052_080--Hb_000203_120 Hb_000086_160 Hb_000086_160 Hb_001053_100--Hb_000086_160 Hb_001053_100--Hb_103931_010 Hb_041067_010 Hb_041067_010 Hb_001053_100--Hb_041067_010 Hb_015085_010 Hb_015085_010 Hb_001053_100--Hb_015085_010 Hb_001396_080 Hb_001396_080 Hb_001053_100--Hb_001396_080 Hb_005183_020 Hb_005183_020 Hb_001053_100--Hb_005183_020 Hb_103931_010--Hb_015085_010 Hb_000164_250 Hb_000164_250 Hb_103931_010--Hb_000164_250 Hb_103931_010--Hb_041067_010 Hb_032280_010 Hb_032280_010 Hb_103931_010--Hb_032280_010 Hb_000172_260 Hb_000172_260 Hb_103931_010--Hb_000172_260 Hb_137821_010 Hb_137821_010 Hb_005463_120--Hb_137821_010 Hb_003747_080 Hb_003747_080 Hb_005463_120--Hb_003747_080 Hb_005463_120--Hb_041067_010 Hb_000527_090 Hb_000527_090 Hb_005463_120--Hb_000527_090 Hb_002217_480 Hb_002217_480 Hb_005463_120--Hb_002217_480 Hb_005463_120--Hb_015085_010 Hb_006275_080 Hb_006275_080 Hb_000027_010--Hb_006275_080 Hb_011689_090 Hb_011689_090 Hb_000027_010--Hb_011689_090 Hb_000710_130 Hb_000710_130 Hb_000027_010--Hb_000710_130 Hb_116679_010 Hb_116679_010 Hb_000027_010--Hb_116679_010 Hb_000186_090 Hb_000186_090 Hb_000027_010--Hb_000186_090 Hb_002025_190 Hb_002025_190 Hb_000628_100--Hb_002025_190 Hb_000999_060 Hb_000999_060 Hb_000628_100--Hb_000999_060 Hb_000628_100--Hb_000164_250 Hb_003777_100 Hb_003777_100 Hb_000628_100--Hb_003777_100 Hb_005695_050 Hb_005695_050 Hb_000628_100--Hb_005695_050 Hb_009851_120 Hb_009851_120 Hb_000628_100--Hb_009851_120
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.103463 1.94469 0.441239 14.7174 0.406528 0.0463028
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0948509 0 0.0392094 0

CAGE analysis