Hb_174644_010

Information

Type -
Description -
Location Contig174644: 92-577
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_174644_010 0.0 - - -
2 Hb_003839_060 0.0483061543 - - PREDICTED: BURP domain-containing protein 11-like [Gossypium raimondii]
3 Hb_023536_020 0.0625771182 - - Nicotianamine synthase, putative [Ricinus communis]
4 Hb_000433_060 0.064010708 - - hypothetical protein EUGRSUZ_B00708, partial [Eucalyptus grandis]
5 Hb_000172_260 0.0875795004 - - PREDICTED: low affinity sulfate transporter 3 [Jatropha curcas]
6 Hb_000164_250 0.0973322473 - - hypothetical protein CISIN_1g040645mg [Citrus sinensis]
7 Hb_003442_020 0.097433927 - - ccd1, putative [Ricinus communis]
8 Hb_032280_010 0.0993364212 - - PREDICTED: probable receptor-like protein kinase At1g67000 isoform X1 [Jatropha curcas]
9 Hb_002411_070 0.0998077927 - - PREDICTED: WAT1-related protein At5g07050 [Jatropha curcas]
10 Hb_001104_250 0.1006337666 transcription factor TF Family: ERF Dehydration-responsive element-binding protein 1B, putative [Ricinus communis]
11 Hb_003777_100 0.1013583301 - - Auxin-induced protein 5NG4, putative [Ricinus communis]
12 Hb_000061_080 0.1020704541 transcription factor TF Family: MYB PREDICTED: transcription factor MYB28-like [Jatropha curcas]
13 Hb_000056_180 0.1021302562 - - -
14 Hb_003059_060 0.1022600121 - - hypothetical protein CICLE_v100140161mg, partial [Citrus clementina]
15 Hb_002374_070 0.102563235 - - amino acid transporter, putative [Ricinus communis]
16 Hb_004125_080 0.1030064258 - - PREDICTED: dCTP pyrophosphatase 1-like [Populus euphratica]
17 Hb_028390_020 0.1046078393 - - -
18 Hb_123887_010 0.1054749894 - - PREDICTED: aldo-keto reductase family 4 member C9-like [Jatropha curcas]
19 Hb_000099_180 0.1055887086 - - PREDICTED: uncharacterized protein LOC104744055 [Camelina sativa]
20 Hb_000373_110 0.10885134 - - Nodulin, putative [Ricinus communis]

Gene co-expression network

sample Hb_174644_010 Hb_174644_010 Hb_003839_060 Hb_003839_060 Hb_174644_010--Hb_003839_060 Hb_023536_020 Hb_023536_020 Hb_174644_010--Hb_023536_020 Hb_000433_060 Hb_000433_060 Hb_174644_010--Hb_000433_060 Hb_000172_260 Hb_000172_260 Hb_174644_010--Hb_000172_260 Hb_000164_250 Hb_000164_250 Hb_174644_010--Hb_000164_250 Hb_003442_020 Hb_003442_020 Hb_174644_010--Hb_003442_020 Hb_003839_060--Hb_003442_020 Hb_001104_250 Hb_001104_250 Hb_003839_060--Hb_001104_250 Hb_123887_010 Hb_123887_010 Hb_003839_060--Hb_123887_010 Hb_003839_060--Hb_023536_020 Hb_003777_100 Hb_003777_100 Hb_003839_060--Hb_003777_100 Hb_002411_070 Hb_002411_070 Hb_023536_020--Hb_002411_070 Hb_000373_110 Hb_000373_110 Hb_023536_020--Hb_000373_110 Hb_002374_070 Hb_002374_070 Hb_023536_020--Hb_002374_070 Hb_023536_020--Hb_000433_060 Hb_031022_040 Hb_031022_040 Hb_000433_060--Hb_031022_040 Hb_014214_010 Hb_014214_010 Hb_000433_060--Hb_014214_010 Hb_000903_050 Hb_000903_050 Hb_000433_060--Hb_000903_050 Hb_005306_200 Hb_005306_200 Hb_000433_060--Hb_005306_200 Hb_001808_010 Hb_001808_010 Hb_000433_060--Hb_001808_010 Hb_032280_010 Hb_032280_010 Hb_000172_260--Hb_032280_010 Hb_000172_260--Hb_000164_250 Hb_000172_260--Hb_003777_100 Hb_004148_030 Hb_004148_030 Hb_000172_260--Hb_004148_030 Hb_041067_010 Hb_041067_010 Hb_000172_260--Hb_041067_010 Hb_103931_010 Hb_103931_010 Hb_000172_260--Hb_103931_010 Hb_000164_250--Hb_003777_100 Hb_000164_250--Hb_032280_010 Hb_000164_250--Hb_041067_010 Hb_000164_250--Hb_103931_010 Hb_010261_050 Hb_010261_050 Hb_000164_250--Hb_010261_050 Hb_003442_020--Hb_010261_050 Hb_003337_010 Hb_003337_010 Hb_003442_020--Hb_003337_010 Hb_003442_020--Hb_001104_250 Hb_003442_020--Hb_123887_010 Hb_003442_020--Hb_003777_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.569751 0.0462676 1.62125 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis