Hb_001808_010

Information

Type -
Description -
Location Contig1808: 5377-5931
Sequence    

Annotation

kegg
ID tcc:TCM_006670
description Disease resistance-responsive (dirigent-like protein) family protein
nr
ID XP_012084365.1
description PREDICTED: dirigent protein 23-like [Jatropha curcas]
swissprot
ID Q84TH6
description Dirigent protein 23 OS=Arabidopsis thaliana GN=DIR23 PE=2 SV=1
trembl
ID A0A067K6W9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19574 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001808_010 0.0 - - PREDICTED: dirigent protein 23-like [Jatropha curcas]
2 Hb_014214_010 0.0755636201 - - PREDICTED: cationic amino acid transporter 6, chloroplastic-like [Jatropha curcas]
3 Hb_000433_060 0.0803792071 - - hypothetical protein EUGRSUZ_B00708, partial [Eucalyptus grandis]
4 Hb_000373_110 0.097394085 - - Nodulin, putative [Ricinus communis]
5 Hb_002422_010 0.1092764109 - - E3 ubiquitin-protein ligase UPL5 [Theobroma cacao]
6 Hb_003012_010 0.1108128778 - - conserved hypothetical protein [Ricinus communis]
7 Hb_005054_010 0.1112627508 - - amino acid transporter, putative [Ricinus communis]
8 Hb_002053_070 0.1129057765 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 14 [Populus euphratica]
9 Hb_004125_080 0.1138231304 - - PREDICTED: dCTP pyrophosphatase 1-like [Populus euphratica]
10 Hb_000976_090 0.1159810364 - - -
11 Hb_000259_100 0.1171013424 - - hypothetical protein CICLE_v10033628mg, partial [Citrus clementina]
12 Hb_000115_260 0.1178239274 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH75 [Vitis vinifera]
13 Hb_005511_070 0.1180329776 - - -
14 Hb_005306_200 0.1187334072 - - -
15 Hb_000903_050 0.1192439106 - - hypothetical protein A259_26892 [Pseudomonas syringae pv. actinidiae ICMP 19070]
16 Hb_174644_010 0.1223906721 - - -
17 Hb_023536_020 0.1247214422 - - Nicotianamine synthase, putative [Ricinus communis]
18 Hb_031022_040 0.1267098654 - - PREDICTED: putative ribonuclease H protein At1g65750 [Beta vulgaris subsp. vulgaris]
19 Hb_022264_010 0.1272321582 - - PREDICTED: uncharacterized protein LOC105795741 [Gossypium raimondii]
20 Hb_168031_010 0.1321478466 - - PREDICTED: protein NRT1/ PTR FAMILY 5.6 [Jatropha curcas]

Gene co-expression network

sample Hb_001808_010 Hb_001808_010 Hb_014214_010 Hb_014214_010 Hb_001808_010--Hb_014214_010 Hb_000433_060 Hb_000433_060 Hb_001808_010--Hb_000433_060 Hb_000373_110 Hb_000373_110 Hb_001808_010--Hb_000373_110 Hb_002422_010 Hb_002422_010 Hb_001808_010--Hb_002422_010 Hb_003012_010 Hb_003012_010 Hb_001808_010--Hb_003012_010 Hb_005054_010 Hb_005054_010 Hb_001808_010--Hb_005054_010 Hb_014214_010--Hb_000433_060 Hb_000976_090 Hb_000976_090 Hb_014214_010--Hb_000976_090 Hb_002053_070 Hb_002053_070 Hb_014214_010--Hb_002053_070 Hb_000903_050 Hb_000903_050 Hb_014214_010--Hb_000903_050 Hb_005306_200 Hb_005306_200 Hb_014214_010--Hb_005306_200 Hb_174644_010 Hb_174644_010 Hb_000433_060--Hb_174644_010 Hb_031022_040 Hb_031022_040 Hb_000433_060--Hb_031022_040 Hb_000433_060--Hb_000903_050 Hb_000433_060--Hb_005306_200 Hb_002411_070 Hb_002411_070 Hb_000373_110--Hb_002411_070 Hb_168031_010 Hb_168031_010 Hb_000373_110--Hb_168031_010 Hb_023536_020 Hb_023536_020 Hb_000373_110--Hb_023536_020 Hb_004125_080 Hb_004125_080 Hb_000373_110--Hb_004125_080 Hb_002116_020 Hb_002116_020 Hb_000373_110--Hb_002116_020 Hb_000373_110--Hb_000433_060 Hb_002422_010--Hb_003012_010 Hb_151616_010 Hb_151616_010 Hb_002422_010--Hb_151616_010 Hb_000167_090 Hb_000167_090 Hb_002422_010--Hb_000167_090 Hb_000286_210 Hb_000286_210 Hb_002422_010--Hb_000286_210 Hb_039410_010 Hb_039410_010 Hb_002422_010--Hb_039410_010 Hb_003012_010--Hb_000286_210 Hb_003012_010--Hb_151616_010 Hb_002639_120 Hb_002639_120 Hb_003012_010--Hb_002639_120 Hb_001318_180 Hb_001318_180 Hb_003012_010--Hb_001318_180 Hb_005054_010--Hb_002116_020 Hb_005054_010--Hb_168031_010 Hb_005054_010--Hb_000373_110 Hb_006590_040 Hb_006590_040 Hb_005054_010--Hb_006590_040 Hb_007885_120 Hb_007885_120 Hb_005054_010--Hb_007885_120 Hb_005054_010--Hb_004125_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.950293 0.0372957 1.71444 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0368109 0

CAGE analysis