Hb_000664_100

Information

Type -
Description -
Location Contig664: 281611-282246
Sequence    

Annotation

kegg
ID rcu:RCOM_0800830
description hypothetical protein
nr
ID XP_012077567.1
description PREDICTED: uncharacterized protein LOC105638386 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KDH2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07738 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_53142: 281936-282255
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000664_100 0.0 - - PREDICTED: uncharacterized protein LOC105638386 [Jatropha curcas]
2 Hb_002965_110 0.1545295701 - - hypothetical protein POPTR_0010s15040g [Populus trichocarpa]
3 Hb_031527_010 0.1824433218 - - conserved hypothetical protein [Ricinus communis]
4 Hb_001520_030 0.1849308173 transcription factor TF Family: MYB PREDICTED: trichome differentiation protein GL1-like isoform X2 [Populus euphratica]
5 Hb_010488_050 0.1931183146 transcription factor TF Family: LIM hypothetical protein JCGZ_14428 [Jatropha curcas]
6 Hb_012002_010 0.1960890336 - - hypothetical protein VITISV_016116 [Vitis vinifera]
7 Hb_002739_140 0.1964242096 - - PREDICTED: protein TPX2 [Jatropha curcas]
8 Hb_143373_010 0.1970080698 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At5g63930 [Gossypium raimondii]
9 Hb_000107_020 0.1975030784 - - PREDICTED: uncharacterized protein LOC105032542 [Elaeis guineensis]
10 Hb_007674_020 0.1982558656 - - PREDICTED: serpin-ZX-like [Jatropha curcas]
11 Hb_000272_080 0.1985953466 - - temperature-induced lipocalin [Populus tremula x Populus tremuloides]
12 Hb_002105_060 0.1987740961 - - hypothetical protein POPTR_0022s00320g [Populus trichocarpa]
13 Hb_000137_120 0.199123182 - - hypothetical protein JCGZ_15021 [Jatropha curcas]
14 Hb_078038_010 0.2000440805 - - hypothetical protein CISIN_1g038197mg [Citrus sinensis]
15 Hb_002311_420 0.2002634432 - - hypothetical protein JCGZ_18919 [Jatropha curcas]
16 Hb_005162_050 0.2017110122 - - hypothetical protein B456_009G352100 [Gossypium raimondii]
17 Hb_004920_150 0.2023354247 - - conserved hypothetical protein [Ricinus communis]
18 Hb_003972_070 0.2023936713 - - PREDICTED: cytochrome P450 85A1-like [Citrus sinensis]
19 Hb_000917_040 0.2037684356 - - PREDICTED: uncharacterized protein LOC105639996 [Jatropha curcas]
20 Hb_000162_010 0.2047075992 - - PREDICTED: dirigent protein 23 [Jatropha curcas]

Gene co-expression network

sample Hb_000664_100 Hb_000664_100 Hb_002965_110 Hb_002965_110 Hb_000664_100--Hb_002965_110 Hb_031527_010 Hb_031527_010 Hb_000664_100--Hb_031527_010 Hb_001520_030 Hb_001520_030 Hb_000664_100--Hb_001520_030 Hb_010488_050 Hb_010488_050 Hb_000664_100--Hb_010488_050 Hb_012002_010 Hb_012002_010 Hb_000664_100--Hb_012002_010 Hb_002739_140 Hb_002739_140 Hb_000664_100--Hb_002739_140 Hb_004713_040 Hb_004713_040 Hb_002965_110--Hb_004713_040 Hb_025213_020 Hb_025213_020 Hb_002965_110--Hb_025213_020 Hb_000806_010 Hb_000806_010 Hb_002965_110--Hb_000806_010 Hb_060783_010 Hb_060783_010 Hb_002965_110--Hb_060783_010 Hb_002965_110--Hb_001520_030 Hb_002311_020 Hb_002311_020 Hb_031527_010--Hb_002311_020 Hb_000805_060 Hb_000805_060 Hb_031527_010--Hb_000805_060 Hb_001014_180 Hb_001014_180 Hb_031527_010--Hb_001014_180 Hb_031527_010--Hb_010488_050 Hb_112765_010 Hb_112765_010 Hb_031527_010--Hb_112765_010 Hb_004920_150 Hb_004920_150 Hb_031527_010--Hb_004920_150 Hb_002925_060 Hb_002925_060 Hb_001520_030--Hb_002925_060 Hb_000959_110 Hb_000959_110 Hb_001520_030--Hb_000959_110 Hb_000193_320 Hb_000193_320 Hb_001520_030--Hb_000193_320 Hb_000377_130 Hb_000377_130 Hb_001520_030--Hb_000377_130 Hb_000334_030 Hb_000334_030 Hb_001520_030--Hb_000334_030 Hb_001712_030 Hb_001712_030 Hb_001520_030--Hb_001712_030 Hb_010488_050--Hb_002739_140 Hb_010488_050--Hb_004920_150 Hb_050514_030 Hb_050514_030 Hb_010488_050--Hb_050514_030 Hb_010488_050--Hb_112765_010 Hb_000162_010 Hb_000162_010 Hb_010488_050--Hb_000162_010 Hb_003972_070 Hb_003972_070 Hb_010488_050--Hb_003972_070 Hb_003913_010 Hb_003913_010 Hb_012002_010--Hb_003913_010 Hb_000563_520 Hb_000563_520 Hb_012002_010--Hb_000563_520 Hb_003906_080 Hb_003906_080 Hb_012002_010--Hb_003906_080 Hb_004393_040 Hb_004393_040 Hb_012002_010--Hb_004393_040 Hb_005991_030 Hb_005991_030 Hb_012002_010--Hb_005991_030 Hb_002739_140--Hb_004920_150 Hb_000776_090 Hb_000776_090 Hb_002739_140--Hb_000776_090 Hb_002739_140--Hb_003972_070 Hb_038927_020 Hb_038927_020 Hb_002739_140--Hb_038927_020 Hb_002739_140--Hb_050514_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.557097 0.115462 0 4.39588 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 3.84113

CAGE analysis