Hb_000806_010

Information

Type -
Description -
Location Contig806: 5296-6113
Sequence    

Annotation

kegg
ID rcu:RCOM_0481320
description hevamine-A precursor, putative (EC:3.2.1.17)
nr
ID XP_012093287.1
description PREDICTED: hevamine-A-like [Jatropha curcas]
swissprot
ID P29060
description Acidic endochitinase OS=Nicotiana tabacum PE=1 SV=1
trembl
ID A0A067L7G6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20076 PE=3 SV=1
Gene Ontology
ID GO:0004553
description chitinase family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000806_010 0.0 - - PREDICTED: hevamine-A-like [Jatropha curcas]
2 Hb_014102_010 0.0643018949 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
3 Hb_003688_120 0.0858670227 - - PREDICTED: uncharacterized protein LOC105350793 [Fragaria vesca subsp. vesca]
4 Hb_000649_090 0.1032764715 - - unnamed protein product [Vitis vinifera]
5 Hb_005207_040 0.1294638255 - - PREDICTED: zinc finger Ran-binding domain-containing protein 2-like [Cicer arietinum]
6 Hb_008714_030 0.1316248874 - - Multidrug resistance protein ABC transporter family protein, putative [Theobroma cacao]
7 Hb_051410_010 0.1418814509 - - PREDICTED: uncharacterized protein LOC103401813 [Malus domestica]
8 Hb_004713_040 0.1454583488 - - hypothetical protein JCGZ_22567 [Jatropha curcas]
9 Hb_000914_010 0.1479339528 - - hypothetical protein POPTR_0025s00760g [Populus trichocarpa]
10 Hb_006755_030 0.14803021 - - BURP domain-containing protein, putative [Theobroma cacao]
11 Hb_000090_010 0.1566152428 - - hypothetical protein JCGZ_22567 [Jatropha curcas]
12 Hb_002559_020 0.1586541894 transcription factor TF Family: TUB -
13 Hb_009423_020 0.1654113406 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
14 Hb_006351_100 0.1655370785 - - hypothetical protein POPTR_0011s01952g [Populus trichocarpa]
15 Hb_001335_020 0.1656476505 - - hypothetical protein CICLE_v10033628mg, partial [Citrus clementina]
16 Hb_019925_010 0.1656979925 - - PREDICTED: long-chain-alcohol oxidase FAO4A-like [Jatropha curcas]
17 Hb_010098_030 0.1659449262 - - conserved hypothetical protein [Ricinus communis]
18 Hb_022973_010 0.1661769961 - - PREDICTED: trans-resveratrol di-O-methyltransferase-like [Jatropha curcas]
19 Hb_000307_020 0.1661915644 - - PREDICTED: uncharacterized protein LOC100255757 [Vitis vinifera]
20 Hb_160190_010 0.1664112195 - - Flavonol synthase/flavanone 3-hydroxylase, putative [Ricinus communis]

Gene co-expression network

sample Hb_000806_010 Hb_000806_010 Hb_014102_010 Hb_014102_010 Hb_000806_010--Hb_014102_010 Hb_003688_120 Hb_003688_120 Hb_000806_010--Hb_003688_120 Hb_000649_090 Hb_000649_090 Hb_000806_010--Hb_000649_090 Hb_005207_040 Hb_005207_040 Hb_000806_010--Hb_005207_040 Hb_008714_030 Hb_008714_030 Hb_000806_010--Hb_008714_030 Hb_051410_010 Hb_051410_010 Hb_000806_010--Hb_051410_010 Hb_014102_010--Hb_003688_120 Hb_014102_010--Hb_000649_090 Hb_014102_010--Hb_005207_040 Hb_169960_010 Hb_169960_010 Hb_014102_010--Hb_169960_010 Hb_002559_020 Hb_002559_020 Hb_014102_010--Hb_002559_020 Hb_003688_120--Hb_005207_040 Hb_003688_120--Hb_000649_090 Hb_003688_120--Hb_169960_010 Hb_003688_120--Hb_002559_020 Hb_000649_090--Hb_051410_010 Hb_000914_010 Hb_000914_010 Hb_000649_090--Hb_000914_010 Hb_000649_090--Hb_169960_010 Hb_005207_040--Hb_002559_020 Hb_060783_010 Hb_060783_010 Hb_005207_040--Hb_060783_010 Hb_005207_040--Hb_169960_010 Hb_001144_030 Hb_001144_030 Hb_005207_040--Hb_001144_030 Hb_000343_090 Hb_000343_090 Hb_008714_030--Hb_000343_090 Hb_000090_010 Hb_000090_010 Hb_008714_030--Hb_000090_010 Hb_006351_090 Hb_006351_090 Hb_008714_030--Hb_006351_090 Hb_000997_370 Hb_000997_370 Hb_008714_030--Hb_000997_370 Hb_003906_080 Hb_003906_080 Hb_008714_030--Hb_003906_080 Hb_010721_040 Hb_010721_040 Hb_008714_030--Hb_010721_040 Hb_051410_010--Hb_000914_010 Hb_011476_010 Hb_011476_010 Hb_051410_010--Hb_011476_010 Hb_004274_010 Hb_004274_010 Hb_051410_010--Hb_004274_010 Hb_051410_010--Hb_014102_010 Hb_000946_130 Hb_000946_130 Hb_051410_010--Hb_000946_130
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0.186858 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0238732 0.23421

CAGE analysis