Hb_006351_090

Information

Type -
Description -
Location Contig6351: 132223-146833
Sequence    

Annotation

kegg
ID tcc:TCM_042635
description UDP-glucosyltransferase family 1 protein
nr
ID KHG01935.1
description UDP-glycosyltransferase 85A1 [Gossypium arboreum]
swissprot
ID U3U992
description 7-deoxyloganetic acid glucosyltransferase OS=Catharanthus roseus GN=UGT709C2 PE=1 SV=1
trembl
ID A0A0B0MME8
description UDP-glycosyltransferase 85A1 OS=Gossypium arboreum GN=F383_23652 PE=3 SV=1
Gene Ontology
ID GO:0016758
description udp-glucosyltransferase family 1 protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_51936: 133884-135727 , PASA_asmbl_51937: 133884-146800
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006351_090 0.0 - - UDP-glycosyltransferase 85A1 [Gossypium arboreum]
2 Hb_002170_030 0.0447052143 - - PREDICTED: laccase-4-like [Jatropha curcas]
3 Hb_003906_080 0.0531663006 - - Peroxidase 66 precursor, putative [Ricinus communis]
4 Hb_009158_040 0.0565723644 - - PREDICTED: auxin-induced protein 15A [Jatropha curcas]
5 Hb_008705_080 0.0630745154 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 14 [Jatropha curcas]
6 Hb_001053_120 0.0639332158 transcription factor TF Family: MYB PREDICTED: transcription factor MYB46-like [Populus euphratica]
7 Hb_023342_010 0.0687702106 - - -
8 Hb_026198_080 0.070851972 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 7 [Populus euphratica]
9 Hb_002311_020 0.0715908658 - - PREDICTED: putative beta-D-xylosidase [Jatropha curcas]
10 Hb_000580_200 0.0744402222 - - PREDICTED: pectinesterase 2 isoform X1 [Jatropha curcas]
11 Hb_000805_060 0.0788295415 - - laccase, putative [Ricinus communis]
12 Hb_004994_230 0.0794774048 transcription factor TF Family: LIM Pollen-specific protein SF3, putative [Ricinus communis]
13 Hb_034507_030 0.0814894628 - - PREDICTED: laccase-4-like [Jatropha curcas]
14 Hb_001163_010 0.0870125919 - - PREDICTED: syncoilin [Jatropha curcas]
15 Hb_001014_180 0.0883937057 - - PREDICTED: probable beta-1,4-xylosyltransferase IRX10 [Jatropha curcas]
16 Hb_000029_210 0.0904777107 - - protein binding protein, putative [Ricinus communis]
17 Hb_135887_010 0.0916938326 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RKS1, partial [Populus euphratica]
18 Hb_000023_100 0.092926911 - - Mechanosensitive channel of small conductance-like 10 [Theobroma cacao]
19 Hb_001123_300 0.0975254678 - - hypothetical protein POPTR_0003s16270g [Populus trichocarpa]
20 Hb_001097_030 0.0983609178 - - nuclear transport factor, putative [Ricinus communis]

Gene co-expression network

sample Hb_006351_090 Hb_006351_090 Hb_002170_030 Hb_002170_030 Hb_006351_090--Hb_002170_030 Hb_003906_080 Hb_003906_080 Hb_006351_090--Hb_003906_080 Hb_009158_040 Hb_009158_040 Hb_006351_090--Hb_009158_040 Hb_008705_080 Hb_008705_080 Hb_006351_090--Hb_008705_080 Hb_001053_120 Hb_001053_120 Hb_006351_090--Hb_001053_120 Hb_023342_010 Hb_023342_010 Hb_006351_090--Hb_023342_010 Hb_002170_030--Hb_023342_010 Hb_002170_030--Hb_009158_040 Hb_002170_030--Hb_001053_120 Hb_002170_030--Hb_008705_080 Hb_026198_080 Hb_026198_080 Hb_002170_030--Hb_026198_080 Hb_002311_020 Hb_002311_020 Hb_003906_080--Hb_002311_020 Hb_003906_080--Hb_002170_030 Hb_004994_230 Hb_004994_230 Hb_003906_080--Hb_004994_230 Hb_000805_060 Hb_000805_060 Hb_003906_080--Hb_000805_060 Hb_003906_080--Hb_023342_010 Hb_009158_040--Hb_001053_120 Hb_009158_040--Hb_026198_080 Hb_009158_040--Hb_023342_010 Hb_001163_010 Hb_001163_010 Hb_009158_040--Hb_001163_010 Hb_008705_080--Hb_026198_080 Hb_008705_080--Hb_000805_060 Hb_008705_080--Hb_001053_120 Hb_008705_080--Hb_009158_040 Hb_001053_120--Hb_001163_010 Hb_001053_120--Hb_023342_010 Hb_000029_210 Hb_000029_210 Hb_001053_120--Hb_000029_210 Hb_001053_120--Hb_026198_080 Hb_000023_100 Hb_000023_100 Hb_023342_010--Hb_000023_100 Hb_023342_010--Hb_026198_080 Hb_023342_010--Hb_000029_210
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0349132 0.248284 2.83663 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0166706 3.97537

CAGE analysis