Hb_003906_080

Information

Type -
Description -
Location Contig3906: 48076-49368
Sequence    

Annotation

kegg
ID rcu:RCOM_1497830
description Peroxidase 66 precursor, putative (EC:1.11.1.7)
nr
ID XP_002510864.1
description Peroxidase 66 precursor, putative [Ricinus communis]
swissprot
ID Q9LT91
description Peroxidase 66 OS=Arabidopsis thaliana GN=PER66 PE=2 SV=1
trembl
ID B9R9I9
description Peroxidase OS=Ricinus communis GN=RCOM_1497830 PE=3 SV=1
Gene Ontology
ID GO:0004601
description peroxidase 66

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_39159: 48019-48881
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003906_080 0.0 - - Peroxidase 66 precursor, putative [Ricinus communis]
2 Hb_006351_090 0.0531663006 - - UDP-glycosyltransferase 85A1 [Gossypium arboreum]
3 Hb_002311_020 0.0582181935 - - PREDICTED: putative beta-D-xylosidase [Jatropha curcas]
4 Hb_002170_030 0.0686479178 - - PREDICTED: laccase-4-like [Jatropha curcas]
5 Hb_004994_230 0.0804767268 transcription factor TF Family: LIM Pollen-specific protein SF3, putative [Ricinus communis]
6 Hb_000805_060 0.0833975347 - - laccase, putative [Ricinus communis]
7 Hb_023342_010 0.0863130577 - - -
8 Hb_005991_030 0.0892161619 - - copper ion binding protein, putative [Ricinus communis]
9 Hb_135887_010 0.0903362592 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RKS1, partial [Populus euphratica]
10 Hb_000580_200 0.0912382469 - - PREDICTED: pectinesterase 2 isoform X1 [Jatropha curcas]
11 Hb_009158_040 0.0927633804 - - PREDICTED: auxin-induced protein 15A [Jatropha curcas]
12 Hb_008705_080 0.0937666499 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 14 [Jatropha curcas]
13 Hb_034507_030 0.09575446 - - PREDICTED: laccase-4-like [Jatropha curcas]
14 Hb_001105_150 0.0972812454 - - GERMIN-LIKE protein 10 [Populus trichocarpa]
15 Hb_011108_010 0.1002040477 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103335582 [Prunus mume]
16 Hb_101705_040 0.1007911511 - - cytochrome P450, putative [Ricinus communis]
17 Hb_000090_010 0.1022254402 - - hypothetical protein JCGZ_22567 [Jatropha curcas]
18 Hb_026198_080 0.1026565709 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 7 [Populus euphratica]
19 Hb_001053_120 0.1031967045 transcription factor TF Family: MYB PREDICTED: transcription factor MYB46-like [Populus euphratica]
20 Hb_001123_300 0.1043021696 - - hypothetical protein POPTR_0003s16270g [Populus trichocarpa]

Gene co-expression network

sample Hb_003906_080 Hb_003906_080 Hb_006351_090 Hb_006351_090 Hb_003906_080--Hb_006351_090 Hb_002311_020 Hb_002311_020 Hb_003906_080--Hb_002311_020 Hb_002170_030 Hb_002170_030 Hb_003906_080--Hb_002170_030 Hb_004994_230 Hb_004994_230 Hb_003906_080--Hb_004994_230 Hb_000805_060 Hb_000805_060 Hb_003906_080--Hb_000805_060 Hb_023342_010 Hb_023342_010 Hb_003906_080--Hb_023342_010 Hb_006351_090--Hb_002170_030 Hb_009158_040 Hb_009158_040 Hb_006351_090--Hb_009158_040 Hb_008705_080 Hb_008705_080 Hb_006351_090--Hb_008705_080 Hb_001053_120 Hb_001053_120 Hb_006351_090--Hb_001053_120 Hb_006351_090--Hb_023342_010 Hb_002311_020--Hb_004994_230 Hb_002311_020--Hb_000805_060 Hb_002311_020--Hb_006351_090 Hb_034507_030 Hb_034507_030 Hb_002311_020--Hb_034507_030 Hb_000090_010 Hb_000090_010 Hb_002311_020--Hb_000090_010 Hb_002170_030--Hb_023342_010 Hb_002170_030--Hb_009158_040 Hb_002170_030--Hb_001053_120 Hb_002170_030--Hb_008705_080 Hb_026198_080 Hb_026198_080 Hb_002170_030--Hb_026198_080 Hb_004994_230--Hb_034507_030 Hb_004994_230--Hb_000090_010 Hb_101705_040 Hb_101705_040 Hb_004994_230--Hb_101705_040 Hb_006483_020 Hb_006483_020 Hb_004994_230--Hb_006483_020 Hb_004994_230--Hb_000805_060 Hb_000805_060--Hb_008705_080 Hb_000805_060--Hb_034507_030 Hb_007281_010 Hb_007281_010 Hb_000805_060--Hb_007281_010 Hb_001014_180 Hb_001014_180 Hb_000805_060--Hb_001014_180 Hb_000023_100 Hb_000023_100 Hb_023342_010--Hb_000023_100 Hb_023342_010--Hb_009158_040 Hb_023342_010--Hb_001053_120 Hb_023342_010--Hb_026198_080 Hb_000029_210 Hb_000029_210 Hb_023342_010--Hb_000029_210
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.237456 1.89177 28.8355 0 0.0255616
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0166186 47.2109

CAGE analysis