Hb_001014_180

Information

Type -
Description -
Location Contig1014: 157627-160814
Sequence    

Annotation

kegg
ID cit:102621903
description probable beta-1,4-xylosyltransferase IRX10-like
nr
ID XP_012088709.1
description PREDICTED: probable beta-1,4-xylosyltransferase IRX10 [Jatropha curcas]
swissprot
ID Q9FZJ1
description Probable beta-1,4-xylosyltransferase IRX10 OS=Arabidopsis thaliana GN=IRX10 PE=2 SV=1
trembl
ID A0A067JH72
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23089 PE=4 SV=1
Gene Ontology
ID GO:0000139
description probable beta- -xylosyltransferase irx10

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001014_180 0.0 - - PREDICTED: probable beta-1,4-xylosyltransferase IRX10 [Jatropha curcas]
2 Hb_007281_010 0.0528000176 - - transferase, transferring glycosyl groups, putative [Ricinus communis]
3 Hb_034507_030 0.0562997854 - - PREDICTED: laccase-4-like [Jatropha curcas]
4 Hb_003972_070 0.0629439171 - - PREDICTED: cytochrome P450 85A1-like [Citrus sinensis]
5 Hb_004117_230 0.0661192806 - - lipid transfer precursor protein [Hevea brasiliensis]
6 Hb_000462_040 0.0672674076 - - ATSMC2, putative [Ricinus communis]
7 Hb_002311_010 0.0677028228 - - PREDICTED: chitinase-like protein 2 [Jatropha curcas]
8 Hb_004920_150 0.0681126816 - - conserved hypothetical protein [Ricinus communis]
9 Hb_038927_020 0.0722611938 - - PREDICTED: rac-like GTP-binding protein RAC13 [Cucumis melo]
10 Hb_002739_140 0.0778035351 - - PREDICTED: protein TPX2 [Jatropha curcas]
11 Hb_000805_060 0.0780198211 - - laccase, putative [Ricinus communis]
12 Hb_000416_020 0.0787818338 - - conserved hypothetical protein [Ricinus communis]
13 Hb_004994_230 0.0791406663 transcription factor TF Family: LIM Pollen-specific protein SF3, putative [Ricinus communis]
14 Hb_158092_090 0.079155891 - - zinc finger protein, putative [Ricinus communis]
15 Hb_006483_020 0.0808021866 - - PREDICTED: PI-PLC X domain-containing protein At5g67130-like isoform X1 [Jatropha curcas]
16 Hb_008705_080 0.0831782592 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 14 [Jatropha curcas]
17 Hb_026198_080 0.0855371071 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 7 [Populus euphratica]
18 Hb_006351_090 0.0883937057 - - UDP-glycosyltransferase 85A1 [Gossypium arboreum]
19 Hb_002311_020 0.088995624 - - PREDICTED: putative beta-D-xylosidase [Jatropha curcas]
20 Hb_010166_010 0.0898349725 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 14 [Jatropha curcas]

Gene co-expression network

sample Hb_001014_180 Hb_001014_180 Hb_007281_010 Hb_007281_010 Hb_001014_180--Hb_007281_010 Hb_034507_030 Hb_034507_030 Hb_001014_180--Hb_034507_030 Hb_003972_070 Hb_003972_070 Hb_001014_180--Hb_003972_070 Hb_004117_230 Hb_004117_230 Hb_001014_180--Hb_004117_230 Hb_000462_040 Hb_000462_040 Hb_001014_180--Hb_000462_040 Hb_002311_010 Hb_002311_010 Hb_001014_180--Hb_002311_010 Hb_007281_010--Hb_002311_010 Hb_038927_020 Hb_038927_020 Hb_007281_010--Hb_038927_020 Hb_007281_010--Hb_000462_040 Hb_007281_010--Hb_034507_030 Hb_001712_030 Hb_001712_030 Hb_007281_010--Hb_001712_030 Hb_004994_230 Hb_004994_230 Hb_034507_030--Hb_004994_230 Hb_006483_020 Hb_006483_020 Hb_034507_030--Hb_006483_020 Hb_000090_010 Hb_000090_010 Hb_034507_030--Hb_000090_010 Hb_034507_030--Hb_000462_040 Hb_002739_140 Hb_002739_140 Hb_003972_070--Hb_002739_140 Hb_004920_150 Hb_004920_150 Hb_003972_070--Hb_004920_150 Hb_003972_070--Hb_002311_010 Hb_003972_070--Hb_007281_010 Hb_003972_070--Hb_038927_020 Hb_004117_230--Hb_004920_150 Hb_004117_230--Hb_034507_030 Hb_004117_230--Hb_006483_020 Hb_004117_230--Hb_007281_010 Hb_004117_230--Hb_000462_040 Hb_000462_040--Hb_001712_030 Hb_001123_300 Hb_001123_300 Hb_000462_040--Hb_001123_300 Hb_000462_040--Hb_006483_020 Hb_008705_080 Hb_008705_080 Hb_000462_040--Hb_008705_080 Hb_002311_010--Hb_038927_020 Hb_001935_060 Hb_001935_060 Hb_002311_010--Hb_001935_060 Hb_001377_220 Hb_001377_220 Hb_002311_010--Hb_001377_220 Hb_000416_020 Hb_000416_020 Hb_002311_010--Hb_000416_020 Hb_010166_010 Hb_010166_010 Hb_002311_010--Hb_010166_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.923367 1.35407 29.9147 0.0127893 0.0547011
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.146849 0 0.175841 31.9549

CAGE analysis