Hb_003972_070

Information

Type -
Description -
Location Contig3972: 121065-124317
Sequence    

Annotation

kegg
ID cit:102627864
description cytochrome P450 85A1-like
nr
ID XP_006484352.1
description PREDICTED: cytochrome P450 85A1-like [Citrus sinensis]
swissprot
ID Q69F95
description Cytochrome P450 85A OS=Phaseolus vulgaris GN=BA13 PE=3 SV=2
trembl
ID V4TMU4
description Uncharacterized protein OS=Citrus clementina GN=CICLE_v10031449mg PE=3 SV=1
Gene Ontology
ID GO:0004497
description cytochrome p450 85a

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003972_070 0.0 - - PREDICTED: cytochrome P450 85A1-like [Citrus sinensis]
2 Hb_002739_140 0.0533627 - - PREDICTED: protein TPX2 [Jatropha curcas]
3 Hb_001014_180 0.0629439171 - - PREDICTED: probable beta-1,4-xylosyltransferase IRX10 [Jatropha curcas]
4 Hb_004920_150 0.0645844978 - - conserved hypothetical protein [Ricinus communis]
5 Hb_002311_010 0.0672227336 - - PREDICTED: chitinase-like protein 2 [Jatropha curcas]
6 Hb_007281_010 0.0719109064 - - transferase, transferring glycosyl groups, putative [Ricinus communis]
7 Hb_038927_020 0.0748779782 - - PREDICTED: rac-like GTP-binding protein RAC13 [Cucumis melo]
8 Hb_050514_030 0.0751862933 - - PREDICTED: protein trichome birefringence-like 34 [Jatropha curcas]
9 Hb_010488_050 0.0778634175 transcription factor TF Family: LIM hypothetical protein JCGZ_14428 [Jatropha curcas]
10 Hb_010166_010 0.0792812728 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 14 [Jatropha curcas]
11 Hb_034507_030 0.0796475409 - - PREDICTED: laccase-4-like [Jatropha curcas]
12 Hb_000776_090 0.0802791017 - - PREDICTED: COBRA-like protein 4 [Jatropha curcas]
13 Hb_001935_060 0.0832452093 - - PREDICTED: metalloendoproteinase 1 [Jatropha curcas]
14 Hb_004117_230 0.0865584325 - - lipid transfer precursor protein [Hevea brasiliensis]
15 Hb_000111_060 0.0868196402 transcription factor TF Family: SRS PREDICTED: protein SHI RELATED SEQUENCE 6 isoform X2 [Jatropha curcas]
16 Hb_026198_080 0.0873083059 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 7 [Populus euphratica]
17 Hb_000805_060 0.0886868029 - - laccase, putative [Ricinus communis]
18 Hb_112765_010 0.0891341922 - - conserved hypothetical protein [Ricinus communis]
19 Hb_000416_020 0.0896799759 - - conserved hypothetical protein [Ricinus communis]
20 Hb_001377_220 0.0904532584 - - dopamine beta-monooxygenase, putative [Ricinus communis]

Gene co-expression network

sample Hb_003972_070 Hb_003972_070 Hb_002739_140 Hb_002739_140 Hb_003972_070--Hb_002739_140 Hb_001014_180 Hb_001014_180 Hb_003972_070--Hb_001014_180 Hb_004920_150 Hb_004920_150 Hb_003972_070--Hb_004920_150 Hb_002311_010 Hb_002311_010 Hb_003972_070--Hb_002311_010 Hb_007281_010 Hb_007281_010 Hb_003972_070--Hb_007281_010 Hb_038927_020 Hb_038927_020 Hb_003972_070--Hb_038927_020 Hb_002739_140--Hb_004920_150 Hb_000776_090 Hb_000776_090 Hb_002739_140--Hb_000776_090 Hb_002739_140--Hb_038927_020 Hb_010488_050 Hb_010488_050 Hb_002739_140--Hb_010488_050 Hb_050514_030 Hb_050514_030 Hb_002739_140--Hb_050514_030 Hb_001014_180--Hb_007281_010 Hb_034507_030 Hb_034507_030 Hb_001014_180--Hb_034507_030 Hb_004117_230 Hb_004117_230 Hb_001014_180--Hb_004117_230 Hb_000462_040 Hb_000462_040 Hb_001014_180--Hb_000462_040 Hb_001014_180--Hb_002311_010 Hb_004920_150--Hb_004117_230 Hb_004920_150--Hb_038927_020 Hb_004920_150--Hb_010488_050 Hb_004920_150--Hb_000776_090 Hb_002311_010--Hb_038927_020 Hb_001935_060 Hb_001935_060 Hb_002311_010--Hb_001935_060 Hb_002311_010--Hb_007281_010 Hb_001377_220 Hb_001377_220 Hb_002311_010--Hb_001377_220 Hb_000416_020 Hb_000416_020 Hb_002311_010--Hb_000416_020 Hb_010166_010 Hb_010166_010 Hb_002311_010--Hb_010166_010 Hb_007281_010--Hb_038927_020 Hb_007281_010--Hb_000462_040 Hb_007281_010--Hb_034507_030 Hb_001712_030 Hb_001712_030 Hb_007281_010--Hb_001712_030 Hb_038927_020--Hb_000416_020 Hb_038927_020--Hb_001935_060 Hb_038927_020--Hb_001377_220
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0271916 0.0351336 0.96091 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.891591

CAGE analysis