Hb_000334_030

Information

Type -
Description -
Location Contig334: 19097-20230
Sequence    

Annotation

kegg
ID rcu:RCOM_1255010
description hypothetical protein
nr
ID XP_002525765.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9SIE6
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1255010 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000334_030 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_004930_020 0.0584374377 transcription factor TF Family: MYB PREDICTED: transcriptional activator Myb-like [Jatropha curcas]
3 Hb_184074_010 0.0701812359 - - PREDICTED: uncharacterized protein LOC105639054 [Jatropha curcas]
4 Hb_000959_110 0.0829573891 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 13 [Vitis vinifera]
5 Hb_001500_090 0.0829868279 - - conserved hypothetical protein [Ricinus communis]
6 Hb_002750_030 0.0853323495 - - PREDICTED: protein IRX15-LIKE-like [Populus euphratica]
7 Hb_000193_320 0.0948379227 - - conserved hypothetical protein [Ricinus communis]
8 Hb_064047_020 0.0970104528 transcription factor TF Family: MYB hypothetical protein POPTR_0003s13190g [Populus trichocarpa]
9 Hb_009476_080 0.1009771507 - - BnaA03g18920D [Brassica napus]
10 Hb_006755_030 0.1027660008 - - BURP domain-containing protein, putative [Theobroma cacao]
11 Hb_001019_030 0.1029563322 - - PREDICTED: 4-coumarate--CoA ligase 1-like [Jatropha curcas]
12 Hb_001269_160 0.1059275318 - - conserved hypothetical protein [Ricinus communis]
13 Hb_000009_250 0.1060793269 - - transferase, transferring glycosyl groups, putative [Ricinus communis]
14 Hb_001976_100 0.1061408751 - - PREDICTED: receptor-like cytosolic serine/threonine-protein kinase RBK1 isoform X2 [Jatropha curcas]
15 Hb_000620_050 0.1063180508 - - PREDICTED: uncharacterized protein LOC105649924 [Jatropha curcas]
16 Hb_182869_010 0.1064145315 - - leucine-rich repeat receptor protein kinase exs precursor, putative [Ricinus communis]
17 Hb_002499_030 0.1071423478 - - receptor-kinase, putative [Ricinus communis]
18 Hb_000377_130 0.1076690597 - - hypothetical protein POPTR_0016s00790g [Populus trichocarpa]
19 Hb_001268_290 0.1089464462 - - PREDICTED: glutaredoxin-C1-like [Jatropha curcas]
20 Hb_042083_010 0.1119017189 - - PREDICTED: cellulose synthase A catalytic subunit 8 [UDP-forming] [Jatropha curcas]

Gene co-expression network

sample Hb_000334_030 Hb_000334_030 Hb_004930_020 Hb_004930_020 Hb_000334_030--Hb_004930_020 Hb_184074_010 Hb_184074_010 Hb_000334_030--Hb_184074_010 Hb_000959_110 Hb_000959_110 Hb_000334_030--Hb_000959_110 Hb_001500_090 Hb_001500_090 Hb_000334_030--Hb_001500_090 Hb_002750_030 Hb_002750_030 Hb_000334_030--Hb_002750_030 Hb_000193_320 Hb_000193_320 Hb_000334_030--Hb_000193_320 Hb_004930_020--Hb_000959_110 Hb_004930_020--Hb_184074_010 Hb_001976_100 Hb_001976_100 Hb_004930_020--Hb_001976_100 Hb_000009_250 Hb_000009_250 Hb_004930_020--Hb_000009_250 Hb_001019_030 Hb_001019_030 Hb_004930_020--Hb_001019_030 Hb_000620_050 Hb_000620_050 Hb_184074_010--Hb_000620_050 Hb_184074_010--Hb_000959_110 Hb_003371_280 Hb_003371_280 Hb_184074_010--Hb_003371_280 Hb_006755_030 Hb_006755_030 Hb_184074_010--Hb_006755_030 Hb_000959_110--Hb_006755_030 Hb_000377_130 Hb_000377_130 Hb_000959_110--Hb_000377_130 Hb_186765_010 Hb_186765_010 Hb_000959_110--Hb_186765_010 Hb_001500_090--Hb_000193_320 Hb_001500_090--Hb_002750_030 Hb_000776_090 Hb_000776_090 Hb_001500_090--Hb_000776_090 Hb_000836_640 Hb_000836_640 Hb_001500_090--Hb_000836_640 Hb_009476_080 Hb_009476_080 Hb_001500_090--Hb_009476_080 Hb_001477_050 Hb_001477_050 Hb_001500_090--Hb_001477_050 Hb_002750_030--Hb_000836_640 Hb_000162_010 Hb_000162_010 Hb_002750_030--Hb_000162_010 Hb_002750_030--Hb_001477_050 Hb_005056_040 Hb_005056_040 Hb_002750_030--Hb_005056_040 Hb_064047_020 Hb_064047_020 Hb_002750_030--Hb_064047_020 Hb_002078_180 Hb_002078_180 Hb_000193_320--Hb_002078_180 Hb_000193_320--Hb_000776_090 Hb_000193_320--Hb_009476_080 Hb_000086_490 Hb_000086_490 Hb_000193_320--Hb_000086_490 Hb_015807_090 Hb_015807_090 Hb_000193_320--Hb_015807_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.279749 0.170938 4.60041 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.284265 2.73365

CAGE analysis