Hb_000438_110

Information

Type -
Description -
Location Contig438: 92757-94544
Sequence    

Annotation

kegg
ID pop:POPTR_0013s08100g
description xanthine/uracil permease family protein
nr
ID XP_012091175.1
description PREDICTED: adenine/guanine permease AZG1 [Jatropha curcas]
swissprot
ID Q9SRK7
description Adenine/guanine permease AZG1 OS=Arabidopsis thaliana GN=AZG1 PE=2 SV=1
trembl
ID A0A067JFW1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03344 PE=4 SV=1
Gene Ontology
ID GO:0016020
description adenine guanine permease azg1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_42563: 94231-94589
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000438_110 0.0 - - PREDICTED: adenine/guanine permease AZG1 [Jatropha curcas]
2 Hb_010137_060 0.1338483666 - - PREDICTED: uncharacterized protein LOC105634409 [Jatropha curcas]
3 Hb_143629_100 0.1347669964 - - PREDICTED: phytochrome A [Jatropha curcas]
4 Hb_000152_360 0.1372201569 - - PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP53 [Jatropha curcas]
5 Hb_004032_200 0.1396676852 transcription factor TF Family: SET PREDICTED: uncharacterized protein LOC105635137 [Jatropha curcas]
6 Hb_003086_170 0.1449716276 - - PREDICTED: putative phosphatidylglycerol/phosphatidylinositol transfer protein DDB_G0282179 [Jatropha curcas]
7 Hb_127743_010 0.1485643055 - - PREDICTED: proteasome activator subunit 4 isoform X2 [Jatropha curcas]
8 Hb_004994_020 0.1515773675 - - PREDICTED: probable methyltransferase PMT13 [Jatropha curcas]
9 Hb_012055_040 0.1521153387 - - PREDICTED: U-box domain-containing protein 4 [Jatropha curcas]
10 Hb_003342_020 0.1536961491 - - calcineurin B, putative [Ricinus communis]
11 Hb_011249_070 0.1542415315 - - hypothetical protein POPTR_0018s12610g [Populus trichocarpa]
12 Hb_012518_070 0.1554986331 - - PREDICTED: ubiquitin carboxyl-terminal hydrolase 9 isoform X1 [Jatropha curcas]
13 Hb_010021_030 0.1575738754 - - PREDICTED: pre-mRNA-processing protein 40A isoform X4 [Jatropha curcas]
14 Hb_134362_010 0.158514347 - - PREDICTED: FAS-associated factor 2 [Jatropha curcas]
15 Hb_007597_010 0.1632644633 - - hypothetical protein B456_010G072300 [Gossypium raimondii]
16 Hb_000359_190 0.1636152513 - - PREDICTED: protein VACUOLELESS1 [Nicotiana sylvestris]
17 Hb_002232_360 0.1645263557 - - PREDICTED: proline iminopeptidase isoform X2 [Jatropha curcas]
18 Hb_011819_020 0.1661108527 - - PREDICTED: uncharacterized protein LOC105643703 isoform X1 [Jatropha curcas]
19 Hb_000692_150 0.1674517722 - - PREDICTED: probable prolyl 4-hydroxylase 3 [Jatropha curcas]
20 Hb_000482_190 0.1687697719 - - PREDICTED: serine/threonine-protein kinase EDR1 [Jatropha curcas]

Gene co-expression network

sample Hb_000438_110 Hb_000438_110 Hb_010137_060 Hb_010137_060 Hb_000438_110--Hb_010137_060 Hb_143629_100 Hb_143629_100 Hb_000438_110--Hb_143629_100 Hb_000152_360 Hb_000152_360 Hb_000438_110--Hb_000152_360 Hb_004032_200 Hb_004032_200 Hb_000438_110--Hb_004032_200 Hb_003086_170 Hb_003086_170 Hb_000438_110--Hb_003086_170 Hb_127743_010 Hb_127743_010 Hb_000438_110--Hb_127743_010 Hb_002897_090 Hb_002897_090 Hb_010137_060--Hb_002897_090 Hb_109000_020 Hb_109000_020 Hb_010137_060--Hb_109000_020 Hb_003342_020 Hb_003342_020 Hb_010137_060--Hb_003342_020 Hb_000645_280 Hb_000645_280 Hb_010137_060--Hb_000645_280 Hb_122968_010 Hb_122968_010 Hb_010137_060--Hb_122968_010 Hb_000482_190 Hb_000482_190 Hb_010137_060--Hb_000482_190 Hb_000260_660 Hb_000260_660 Hb_143629_100--Hb_000260_660 Hb_000120_820 Hb_000120_820 Hb_143629_100--Hb_000120_820 Hb_019280_010 Hb_019280_010 Hb_143629_100--Hb_019280_010 Hb_000327_250 Hb_000327_250 Hb_143629_100--Hb_000327_250 Hb_012286_040 Hb_012286_040 Hb_143629_100--Hb_012286_040 Hb_001642_070 Hb_001642_070 Hb_143629_100--Hb_001642_070 Hb_001009_320 Hb_001009_320 Hb_000152_360--Hb_001009_320 Hb_000340_530 Hb_000340_530 Hb_000152_360--Hb_000340_530 Hb_134362_010 Hb_134362_010 Hb_000152_360--Hb_134362_010 Hb_000152_360--Hb_127743_010 Hb_002989_020 Hb_002989_020 Hb_000152_360--Hb_002989_020 Hb_000011_100 Hb_000011_100 Hb_000152_360--Hb_000011_100 Hb_000066_150 Hb_000066_150 Hb_004032_200--Hb_000066_150 Hb_012055_040 Hb_012055_040 Hb_004032_200--Hb_012055_040 Hb_000059_230 Hb_000059_230 Hb_004032_200--Hb_000059_230 Hb_003805_040 Hb_003805_040 Hb_004032_200--Hb_003805_040 Hb_001478_040 Hb_001478_040 Hb_004032_200--Hb_001478_040 Hb_006839_010 Hb_006839_010 Hb_004032_200--Hb_006839_010 Hb_000365_400 Hb_000365_400 Hb_003086_170--Hb_000365_400 Hb_012518_070 Hb_012518_070 Hb_003086_170--Hb_012518_070 Hb_010515_020 Hb_010515_020 Hb_003086_170--Hb_010515_020 Hb_004994_020 Hb_004994_020 Hb_003086_170--Hb_004994_020 Hb_001269_600 Hb_001269_600 Hb_003086_170--Hb_001269_600 Hb_000363_040 Hb_000363_040 Hb_003086_170--Hb_000363_040 Hb_003913_070 Hb_003913_070 Hb_127743_010--Hb_003913_070 Hb_001417_030 Hb_001417_030 Hb_127743_010--Hb_001417_030 Hb_000111_290 Hb_000111_290 Hb_127743_010--Hb_000111_290 Hb_029243_030 Hb_029243_030 Hb_127743_010--Hb_029243_030 Hb_127743_010--Hb_000340_530 Hb_004934_050 Hb_004934_050 Hb_127743_010--Hb_004934_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.44842 4.46964 2.29417 6.20414 4.40989 3.47491
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.434787 4.82948 1.82573 4.80094 4.74622

CAGE analysis