Hb_000152_360

Information

Type -
Description -
Location Contig152: 305321-311366
Sequence    

Annotation

kegg
ID rcu:RCOM_1499110
description FK506-binding protein, putative (EC:5.2.1.8)
nr
ID XP_012090398.1
description PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP53 [Jatropha curcas]
swissprot
ID Q93ZG9
description Peptidyl-prolyl cis-trans isomerase FKBP53 OS=Arabidopsis thaliana GN=FKBP53 PE=1 SV=1
trembl
ID A0A067JS68
description Peptidyl-prolyl cis-trans isomerase OS=Jatropha curcas GN=JCGZ_26220 PE=4 SV=1
Gene Ontology
ID GO:0016853
description peptidyl-prolyl cis-trans isomerase fkbp53

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_12988: 305281-305605 , PASA_asmbl_12989: 305632-307281 , PASA_asmbl_12990: 308451-311288
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000152_360 0.0 - - PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP53 [Jatropha curcas]
2 Hb_001009_320 0.0759854038 - - PREDICTED: uncharacterized protein LOC105640250 [Jatropha curcas]
3 Hb_000340_530 0.0787761577 - - hypothetical protein VITISV_016664 [Vitis vinifera]
4 Hb_134362_010 0.0840945142 - - PREDICTED: FAS-associated factor 2 [Jatropha curcas]
5 Hb_127743_010 0.0845849991 - - PREDICTED: proteasome activator subunit 4 isoform X2 [Jatropha curcas]
6 Hb_002989_020 0.0848967426 - - PREDICTED: uncharacterized protein LOC105630013 isoform X2 [Jatropha curcas]
7 Hb_000011_100 0.0852141052 - - PREDICTED: uncharacterized protein C630.12 [Jatropha curcas]
8 Hb_000477_050 0.0860369448 - - PREDICTED: 26S protease regulatory subunit 8 homolog A [Jatropha curcas]
9 Hb_001189_090 0.088043525 - - carbon catabolite repressor protein, putative [Ricinus communis]
10 Hb_000006_010 0.0886584673 - - conserved hypothetical protein [Ricinus communis]
11 Hb_000473_110 0.0894607552 - - PREDICTED: PP2A regulatory subunit TAP46 [Jatropha curcas]
12 Hb_012518_070 0.0900038771 - - PREDICTED: ubiquitin carboxyl-terminal hydrolase 9 isoform X1 [Jatropha curcas]
13 Hb_000460_080 0.0901713764 - - acyl-coenzyme A binding domain containing, putative [Ricinus communis]
14 Hb_004267_040 0.0903283033 - - PREDICTED: transcriptional adapter ADA2a [Jatropha curcas]
15 Hb_001814_030 0.0904520874 - - PREDICTED: uncharacterized protein LOC105650634 [Jatropha curcas]
16 Hb_000710_040 0.0906227239 - - PREDICTED: HEAT repeat-containing protein 6 [Jatropha curcas]
17 Hb_001679_050 0.0907530088 - - PREDICTED: exocyst complex component EXO84B [Jatropha curcas]
18 Hb_159558_010 0.0912013565 - - PREDICTED: uncharacterized protein LOC105635846 [Jatropha curcas]
19 Hb_001668_010 0.0913007484 - - PREDICTED: RNA-binding protein with multiple splicing [Jatropha curcas]
20 Hb_000120_280 0.0914686443 - - PREDICTED: protein transport protein SEC23 [Jatropha curcas]

Gene co-expression network

sample Hb_000152_360 Hb_000152_360 Hb_001009_320 Hb_001009_320 Hb_000152_360--Hb_001009_320 Hb_000340_530 Hb_000340_530 Hb_000152_360--Hb_000340_530 Hb_134362_010 Hb_134362_010 Hb_000152_360--Hb_134362_010 Hb_127743_010 Hb_127743_010 Hb_000152_360--Hb_127743_010 Hb_002989_020 Hb_002989_020 Hb_000152_360--Hb_002989_020 Hb_000011_100 Hb_000011_100 Hb_000152_360--Hb_000011_100 Hb_000006_010 Hb_000006_010 Hb_001009_320--Hb_000006_010 Hb_000477_050 Hb_000477_050 Hb_001009_320--Hb_000477_050 Hb_000522_170 Hb_000522_170 Hb_001009_320--Hb_000522_170 Hb_000120_280 Hb_000120_280 Hb_001009_320--Hb_000120_280 Hb_015807_050 Hb_015807_050 Hb_001009_320--Hb_015807_050 Hb_000313_220 Hb_000313_220 Hb_001009_320--Hb_000313_220 Hb_000340_530--Hb_002989_020 Hb_011063_050 Hb_011063_050 Hb_000340_530--Hb_011063_050 Hb_093458_040 Hb_093458_040 Hb_000340_530--Hb_093458_040 Hb_001679_050 Hb_001679_050 Hb_000340_530--Hb_001679_050 Hb_000116_450 Hb_000116_450 Hb_000340_530--Hb_000116_450 Hb_004109_080 Hb_004109_080 Hb_000340_530--Hb_004109_080 Hb_009252_050 Hb_009252_050 Hb_134362_010--Hb_009252_050 Hb_001668_010 Hb_001668_010 Hb_134362_010--Hb_001668_010 Hb_001673_050 Hb_001673_050 Hb_134362_010--Hb_001673_050 Hb_002849_170 Hb_002849_170 Hb_134362_010--Hb_002849_170 Hb_000352_070 Hb_000352_070 Hb_134362_010--Hb_000352_070 Hb_004429_010 Hb_004429_010 Hb_134362_010--Hb_004429_010 Hb_003913_070 Hb_003913_070 Hb_127743_010--Hb_003913_070 Hb_001417_030 Hb_001417_030 Hb_127743_010--Hb_001417_030 Hb_000111_290 Hb_000111_290 Hb_127743_010--Hb_000111_290 Hb_029243_030 Hb_029243_030 Hb_127743_010--Hb_029243_030 Hb_127743_010--Hb_000340_530 Hb_004934_050 Hb_004934_050 Hb_127743_010--Hb_004934_050 Hb_002989_020--Hb_011063_050 Hb_010142_020 Hb_010142_020 Hb_002989_020--Hb_010142_020 Hb_002989_020--Hb_093458_040 Hb_002989_020--Hb_000477_050 Hb_002989_020--Hb_001679_050 Hb_004267_040 Hb_004267_040 Hb_000011_100--Hb_004267_040 Hb_000710_040 Hb_000710_040 Hb_000011_100--Hb_000710_040 Hb_001430_080 Hb_001430_080 Hb_000011_100--Hb_001430_080 Hb_000398_080 Hb_000398_080 Hb_000011_100--Hb_000398_080 Hb_000011_100--Hb_000120_280 Hb_000563_130 Hb_000563_130 Hb_000011_100--Hb_000563_130
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
4.01786 7.27253 5.95169 7.23712 8.21246 5.30461
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.61907 6.21248 4.60552 7.27414 6.37059

CAGE analysis