Hb_000522_170

Information

Type -
Description -
Location Contig522: 147404-152187
Sequence    

Annotation

kegg
ID tcc:TCM_021801
description Inositol phosphorylceramide synthase 1
nr
ID XP_012087965.1
description PREDICTED: phosphatidylinositol:ceramide inositolphosphotransferase 1 [Jatropha curcas]
swissprot
ID Q9M325
description Phosphatidylinositol:ceramide inositolphosphotransferase 1 OS=Arabidopsis thaliana GN=IPCS1 PE=2 SV=1
trembl
ID A0A067JKU9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25086 PE=4 SV=1
Gene Ontology
ID GO:0033188
description phosphatidylinositol:ceramide inositolphosphotransferase 1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_46849: 147499-149131 , PASA_asmbl_46850: 147504-149131 , PASA_asmbl_46851: 151432-152042
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000522_170 0.0 - - PREDICTED: phosphatidylinositol:ceramide inositolphosphotransferase 1 [Jatropha curcas]
2 Hb_000317_470 0.0634872769 - - PREDICTED: CCR4-NOT transcription complex subunit 11 [Jatropha curcas]
3 Hb_001009_320 0.0639816461 - - PREDICTED: uncharacterized protein LOC105640250 [Jatropha curcas]
4 Hb_000006_010 0.0673419451 - - conserved hypothetical protein [Ricinus communis]
5 Hb_001221_080 0.070561708 - - PREDICTED: conserved oligomeric Golgi complex subunit 2 isoform X2 [Jatropha curcas]
6 Hb_021419_030 0.0712318246 - - hypothetical protein glysoja_023295 [Glycine soja]
7 Hb_000139_260 0.0759881226 - - PREDICTED: protein phosphatase 2C 70 [Jatropha curcas]
8 Hb_000029_300 0.0794181439 - - hypothetical protein JCGZ_10048 [Jatropha curcas]
9 Hb_013399_020 0.0800827993 - - PREDICTED: developmentally-regulated G-protein 2 [Jatropha curcas]
10 Hb_033286_010 0.0810820255 - - PREDICTED: probable beta-1,3-galactosyltransferase 14 [Jatropha curcas]
11 Hb_017700_010 0.0812247191 - - PREDICTED: probable protein S-acyltransferase 15 [Jatropha curcas]
12 Hb_002301_300 0.0832800626 - - PREDICTED: dol-P-Glc:Glc(2)Man(9)GlcNAc(2)-PP-Dol alpha-1,2-glucosyltransferase isoform X1 [Jatropha curcas]
13 Hb_002092_080 0.08552586 - - PREDICTED: serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform-like [Jatropha curcas]
14 Hb_116349_070 0.088321501 - - hypothetical protein JCGZ_21753 [Jatropha curcas]
15 Hb_000120_280 0.088639882 - - PREDICTED: protein transport protein SEC23 [Jatropha curcas]
16 Hb_034432_030 0.0886531854 - - PREDICTED: probable glycosyltransferase At5g20260 isoform X1 [Jatropha curcas]
17 Hb_001047_220 0.0886832317 - - PREDICTED: F-box protein SKIP17-like [Jatropha curcas]
18 Hb_123915_040 0.0903781077 - - PREDICTED: uncharacterized protein LOC105633952 [Jatropha curcas]
19 Hb_003861_050 0.091229744 - - PREDICTED: uncharacterized protein LOC105650779 [Jatropha curcas]
20 Hb_002276_170 0.0914016916 transcription factor TF Family: bHLH conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_000522_170 Hb_000522_170 Hb_000317_470 Hb_000317_470 Hb_000522_170--Hb_000317_470 Hb_001009_320 Hb_001009_320 Hb_000522_170--Hb_001009_320 Hb_000006_010 Hb_000006_010 Hb_000522_170--Hb_000006_010 Hb_001221_080 Hb_001221_080 Hb_000522_170--Hb_001221_080 Hb_021419_030 Hb_021419_030 Hb_000522_170--Hb_021419_030 Hb_000139_260 Hb_000139_260 Hb_000522_170--Hb_000139_260 Hb_123915_040 Hb_123915_040 Hb_000317_470--Hb_123915_040 Hb_032986_010 Hb_032986_010 Hb_000317_470--Hb_032986_010 Hb_003163_020 Hb_003163_020 Hb_000317_470--Hb_003163_020 Hb_007416_300 Hb_007416_300 Hb_000317_470--Hb_007416_300 Hb_002272_130 Hb_002272_130 Hb_000317_470--Hb_002272_130 Hb_001009_320--Hb_000006_010 Hb_000477_050 Hb_000477_050 Hb_001009_320--Hb_000477_050 Hb_000120_280 Hb_000120_280 Hb_001009_320--Hb_000120_280 Hb_015807_050 Hb_015807_050 Hb_001009_320--Hb_015807_050 Hb_000313_220 Hb_000313_220 Hb_001009_320--Hb_000313_220 Hb_000006_010--Hb_000139_260 Hb_023313_040 Hb_023313_040 Hb_000006_010--Hb_023313_040 Hb_000803_270 Hb_000803_270 Hb_000006_010--Hb_000803_270 Hb_000336_210 Hb_000336_210 Hb_000006_010--Hb_000336_210 Hb_000441_220 Hb_000441_220 Hb_001221_080--Hb_000441_220 Hb_001408_140 Hb_001408_140 Hb_001221_080--Hb_001408_140 Hb_000029_300 Hb_000029_300 Hb_001221_080--Hb_000029_300 Hb_002909_140 Hb_002909_140 Hb_001221_080--Hb_002909_140 Hb_013399_020 Hb_013399_020 Hb_001221_080--Hb_013399_020 Hb_000213_010 Hb_000213_010 Hb_001221_080--Hb_000213_010 Hb_021419_030--Hb_001408_140 Hb_000915_180 Hb_000915_180 Hb_021419_030--Hb_000915_180 Hb_021419_030--Hb_123915_040 Hb_000905_110 Hb_000905_110 Hb_021419_030--Hb_000905_110 Hb_000340_530 Hb_000340_530 Hb_021419_030--Hb_000340_530 Hb_021419_030--Hb_000336_210 Hb_002014_040 Hb_002014_040 Hb_000139_260--Hb_002014_040 Hb_001005_030 Hb_001005_030 Hb_000139_260--Hb_001005_030 Hb_004912_030 Hb_004912_030 Hb_000139_260--Hb_004912_030 Hb_139002_010 Hb_139002_010 Hb_000139_260--Hb_139002_010 Hb_010272_010 Hb_010272_010 Hb_000139_260--Hb_010272_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
10.3264 10.7194 15.5756 17.0001 21.7467 12.9003
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
10.3298 10.3027 13.4626 13.1119 10.2915

CAGE analysis