Hb_000416_120

Information

Type -
Description -
Location Contig416: 120243-121985
Sequence    

Annotation

kegg
ID mtr:MTR_4g016820
description Receptor-like protein kinase
nr
ID KHN19489.1
description Putative LRR receptor-like serine/threonine-protein kinase, partial [Glycine soja]
swissprot
ID -
description -
trembl
ID A0A0B2QGX5
description Putative LRR receptor-like serine/threonine-protein kinase (Fragment) OS=Glycine soja GN=glysoja_026104 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_41158: 121111-121272
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000416_120 0.0 - - Putative LRR receptor-like serine/threonine-protein kinase, partial [Glycine soja]
2 Hb_005854_050 0.2571756333 - - conserved hypothetical protein [Ricinus communis]
3 Hb_005597_010 0.2782795556 - - -
4 Hb_142382_010 0.2805975326 rubber biosynthesis Gene Name: Hydroxymethylglutaryl coenzyme A reductase hydroxymethylglutaryl-CoA reductase [Hevea brasiliensis]
5 Hb_113803_010 0.2885474054 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
6 Hb_002267_120 0.2933165114 - - hypothetical protein B456_009G136300 [Gossypium raimondii]
7 Hb_130067_010 0.2942344328 - - PREDICTED: uncharacterized protein LOC105636491 [Jatropha curcas]
8 Hb_001369_140 0.2978465857 - - conserved hypothetical protein [Ricinus communis]
9 Hb_064122_010 0.2985004056 - - PREDICTED: uncharacterized protein LOC105631858 isoform X2 [Jatropha curcas]
10 Hb_005152_010 0.3019488955 - - hypothetical protein JCGZ_22048 [Jatropha curcas]
11 Hb_006971_080 0.3021936389 - - hypothetical protein PRUPE_ppa015000mg [Prunus persica]
12 Hb_030394_050 0.3043404164 - - lipid binding protein, putative [Ricinus communis]
13 Hb_173741_010 0.3065130005 - - PREDICTED: caffeoyl-CoA O-methyltransferase isoform X3 [Musa acuminata subsp. malaccensis]
14 Hb_000589_210 0.3071148058 - - PREDICTED: uncharacterized protein LOC105647439 [Jatropha curcas]
15 Hb_003455_010 0.3071751057 - - hypothetical protein POPTR_0009s14040g [Populus trichocarpa]
16 Hb_002217_490 0.3075335526 - - -
17 Hb_147355_030 0.3134391987 - - PREDICTED: putative disease resistance protein RGA3 isoform X5 [Populus euphratica]
18 Hb_082960_020 0.3152325763 - - hypothetical protein B456_012G107300 [Gossypium raimondii]
19 Hb_053162_010 0.3152564134 - - PREDICTED: uncharacterized protein LOC105634374 [Jatropha curcas]
20 Hb_004242_210 0.316170258 - - PREDICTED: uncharacterized protein LOC105633248 [Jatropha curcas]

Gene co-expression network

sample Hb_000416_120 Hb_000416_120 Hb_005854_050 Hb_005854_050 Hb_000416_120--Hb_005854_050 Hb_005597_010 Hb_005597_010 Hb_000416_120--Hb_005597_010 Hb_142382_010 Hb_142382_010 Hb_000416_120--Hb_142382_010 Hb_113803_010 Hb_113803_010 Hb_000416_120--Hb_113803_010 Hb_002267_120 Hb_002267_120 Hb_000416_120--Hb_002267_120 Hb_130067_010 Hb_130067_010 Hb_000416_120--Hb_130067_010 Hb_004033_020 Hb_004033_020 Hb_005854_050--Hb_004033_020 Hb_121694_010 Hb_121694_010 Hb_005854_050--Hb_121694_010 Hb_000011_380 Hb_000011_380 Hb_005854_050--Hb_000011_380 Hb_034280_010 Hb_034280_010 Hb_005854_050--Hb_034280_010 Hb_014096_010 Hb_014096_010 Hb_005854_050--Hb_014096_010 Hb_003455_010 Hb_003455_010 Hb_005854_050--Hb_003455_010 Hb_000640_110 Hb_000640_110 Hb_005597_010--Hb_000640_110 Hb_004242_210 Hb_004242_210 Hb_005597_010--Hb_004242_210 Hb_030885_020 Hb_030885_020 Hb_005597_010--Hb_030885_020 Hb_005597_010--Hb_003455_010 Hb_004770_060 Hb_004770_060 Hb_005597_010--Hb_004770_060 Hb_003090_230 Hb_003090_230 Hb_142382_010--Hb_003090_230 Hb_000676_380 Hb_000676_380 Hb_142382_010--Hb_000676_380 Hb_004875_040 Hb_004875_040 Hb_142382_010--Hb_004875_040 Hb_001856_150 Hb_001856_150 Hb_142382_010--Hb_001856_150 Hb_001775_130 Hb_001775_130 Hb_142382_010--Hb_001775_130 Hb_020805_110 Hb_020805_110 Hb_142382_010--Hb_020805_110 Hb_147355_030 Hb_147355_030 Hb_113803_010--Hb_147355_030 Hb_005656_110 Hb_005656_110 Hb_113803_010--Hb_005656_110 Hb_000248_090 Hb_000248_090 Hb_113803_010--Hb_000248_090 Hb_003938_220 Hb_003938_220 Hb_113803_010--Hb_003938_220 Hb_002903_030 Hb_002903_030 Hb_113803_010--Hb_002903_030 Hb_004607_010 Hb_004607_010 Hb_113803_010--Hb_004607_010 Hb_006971_080 Hb_006971_080 Hb_002267_120--Hb_006971_080 Hb_008226_110 Hb_008226_110 Hb_002267_120--Hb_008226_110 Hb_005392_100 Hb_005392_100 Hb_002267_120--Hb_005392_100 Hb_002267_120--Hb_147355_030 Hb_082960_020 Hb_082960_020 Hb_002267_120--Hb_082960_020 Hb_002267_120--Hb_003455_010 Hb_000029_100 Hb_000029_100 Hb_130067_010--Hb_000029_100 Hb_000603_070 Hb_000603_070 Hb_130067_010--Hb_000603_070 Hb_001916_080 Hb_001916_080 Hb_130067_010--Hb_001916_080 Hb_000157_080 Hb_000157_080 Hb_130067_010--Hb_000157_080 Hb_090158_010 Hb_090158_010 Hb_130067_010--Hb_090158_010 Hb_000656_190 Hb_000656_190 Hb_130067_010--Hb_000656_190
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.0295675 0.615743 0 0.108217
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0902329 0.0709259 0 0.579266 0

CAGE analysis