Hb_001916_080

Information

Type -
Description -
Location Contig1916: 91520-92059
Sequence    

Annotation

kegg
ID rcu:RCOM_0347130
description hypothetical protein
nr
ID XP_012081528.1
description PREDICTED: uncharacterized protein LOC105641552 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067K1B8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18496 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001916_080 0.0 - - PREDICTED: uncharacterized protein LOC105641552 [Jatropha curcas]
2 Hb_003695_010 0.2775759895 - - PREDICTED: uncharacterized protein LOC104104926 [Nicotiana tomentosiformis]
3 Hb_130067_010 0.2820620461 - - PREDICTED: uncharacterized protein LOC105636491 [Jatropha curcas]
4 Hb_013818_050 0.2959689908 - - PREDICTED: uncharacterized protein LOC105629143 isoform X2 [Jatropha curcas]
5 Hb_001021_180 0.310416415 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850 [Nicotiana tomentosiformis]
6 Hb_102699_010 0.3133991581 desease resistance Gene Name: NB-ARC NBS-LRR type disease resistance protein [Populus trichocarpa]
7 Hb_007574_030 0.3204169285 - - hypothetical protein POPTR_0006s24510g [Populus trichocarpa]
8 Hb_017462_010 0.3234932723 - - -
9 Hb_000157_080 0.3239829011 transcription factor TF Family: GNAT PREDICTED: uncharacterized N-acetyltransferase ycf52 [Jatropha curcas]
10 Hb_005048_040 0.3345275438 - - PREDICTED: endonuclease 1 [Jatropha curcas]
11 Hb_007484_040 0.3361247534 - - -
12 Hb_000135_070 0.3462030825 - - PREDICTED: inositol oxygenase 1-like [Jatropha curcas]
13 Hb_009393_190 0.3511838032 - - PREDICTED: E3 ubiquitin-protein ligase AIP2-like [Jatropha curcas]
14 Hb_033044_010 0.3537367489 - - PREDICTED: brefeldin A-inhibited guanine nucleotide-exchange protein 5-like isoform X3 [Gossypium raimondii]
15 Hb_000031_040 0.3606012493 - - centromere protein O [Medicago truncatula]
16 Hb_000981_040 0.363685347 - - -
17 Hb_021596_080 0.3638880414 - - 50S ribosomal protein L33A [Hevea brasiliensis]
18 Hb_014834_040 0.365113747 - - hypothetical protein JCGZ_03409 [Jatropha curcas]
19 Hb_000574_280 0.3685079611 - - hypothetical protein POPTR_0006s28780g [Populus trichocarpa]
20 Hb_003124_180 0.3698471754 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]

Gene co-expression network

sample Hb_001916_080 Hb_001916_080 Hb_003695_010 Hb_003695_010 Hb_001916_080--Hb_003695_010 Hb_130067_010 Hb_130067_010 Hb_001916_080--Hb_130067_010 Hb_013818_050 Hb_013818_050 Hb_001916_080--Hb_013818_050 Hb_001021_180 Hb_001021_180 Hb_001916_080--Hb_001021_180 Hb_102699_010 Hb_102699_010 Hb_001916_080--Hb_102699_010 Hb_007574_030 Hb_007574_030 Hb_001916_080--Hb_007574_030 Hb_000981_040 Hb_000981_040 Hb_003695_010--Hb_000981_040 Hb_116632_010 Hb_116632_010 Hb_003695_010--Hb_116632_010 Hb_017462_010 Hb_017462_010 Hb_003695_010--Hb_017462_010 Hb_000204_020 Hb_000204_020 Hb_003695_010--Hb_000204_020 Hb_003695_010--Hb_013818_050 Hb_000289_080 Hb_000289_080 Hb_003695_010--Hb_000289_080 Hb_000029_100 Hb_000029_100 Hb_130067_010--Hb_000029_100 Hb_000603_070 Hb_000603_070 Hb_130067_010--Hb_000603_070 Hb_000157_080 Hb_000157_080 Hb_130067_010--Hb_000157_080 Hb_090158_010 Hb_090158_010 Hb_130067_010--Hb_090158_010 Hb_000656_190 Hb_000656_190 Hb_130067_010--Hb_000656_190 Hb_012052_010 Hb_012052_010 Hb_013818_050--Hb_012052_010 Hb_001427_060 Hb_001427_060 Hb_013818_050--Hb_001427_060 Hb_013818_050--Hb_017462_010 Hb_007484_040 Hb_007484_040 Hb_013818_050--Hb_007484_040 Hb_003964_090 Hb_003964_090 Hb_013818_050--Hb_003964_090 Hb_014834_040 Hb_014834_040 Hb_013818_050--Hb_014834_040 Hb_009393_190 Hb_009393_190 Hb_001021_180--Hb_009393_190 Hb_008442_010 Hb_008442_010 Hb_001021_180--Hb_008442_010 Hb_004931_080 Hb_004931_080 Hb_001021_180--Hb_004931_080 Hb_000326_050 Hb_000326_050 Hb_001021_180--Hb_000326_050 Hb_001021_180--Hb_000157_080 Hb_089685_010 Hb_089685_010 Hb_001021_180--Hb_089685_010 Hb_005595_020 Hb_005595_020 Hb_102699_010--Hb_005595_020 Hb_072775_010 Hb_072775_010 Hb_102699_010--Hb_072775_010 Hb_102699_010--Hb_007484_040 Hb_016777_030 Hb_016777_030 Hb_102699_010--Hb_016777_030 Hb_157340_010 Hb_157340_010 Hb_102699_010--Hb_157340_010 Hb_000135_070 Hb_000135_070 Hb_007574_030--Hb_000135_070 Hb_002411_060 Hb_002411_060 Hb_007574_030--Hb_002411_060 Hb_003020_210 Hb_003020_210 Hb_007574_030--Hb_003020_210 Hb_134429_010 Hb_134429_010 Hb_007574_030--Hb_134429_010 Hb_005048_040 Hb_005048_040 Hb_007574_030--Hb_005048_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.0804451 0.0608279 0 0.215579
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.118612 0.0931979 0 0.230957 0

CAGE analysis