Hb_016777_030

Information

Type -
Description -
Location Contig16777: 23680-27268
Sequence    

Annotation

kegg
ID rcu:RCOM_1196270
description cytochrome C oxidase assembly protein cox11, putative
nr
ID XP_012065140.1
description PREDICTED: cytochrome c oxidase assembly protein COX11, mitochondrial [Jatropha curcas]
swissprot
ID Q8GWR0
description Cytochrome c oxidase assembly protein COX11, mitochondrial OS=Arabidopsis thaliana GN=COX11 PE=2 SV=1
trembl
ID A0A067LEA9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11167 PE=3 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_016777_030 0.0 - - PREDICTED: cytochrome c oxidase assembly protein COX11, mitochondrial [Jatropha curcas]
2 Hb_000705_330 0.2427712994 transcription factor TF Family: C2H2 Transcriptional regulator SUPERMAN, putative [Ricinus communis]
3 Hb_002053_040 0.2915263135 - - PREDICTED: AT-hook motif nuclear-localized protein 24 [Jatropha curcas]
4 Hb_043999_010 0.2973259068 - - PREDICTED: uncharacterized protein LOC105629587 [Jatropha curcas]
5 Hb_007765_090 0.2974283957 - - unknown [Glycine max]
6 Hb_001105_060 0.2979875307 - - hypothetical protein CISIN_1g0045352mg, partial [Citrus sinensis]
7 Hb_000809_150 0.2981969004 - - -
8 Hb_131621_010 0.299764917 - - hypothetical protein MIMGU_mgv1a004274mg [Erythranthe guttata]
9 Hb_000252_230 0.3017358649 - - hypothetical protein B456_008G160800 [Gossypium raimondii]
10 Hb_007639_010 0.3020438585 - - hypothetical protein JCGZ_11284 [Jatropha curcas]
11 Hb_003362_010 0.3024586515 - - Actin-related protein 2/3 complex subunit 4 [Morus notabilis]
12 Hb_150498_010 0.3038049798 - - hypothetical protein CICLE_v10033628mg, partial [Citrus clementina]
13 Hb_129358_010 0.3041789844 - - PREDICTED: AT-hook motif nuclear-localized protein 11-like [Jatropha curcas]
14 Hb_010272_020 0.3080797636 - - hypothetical protein VITISV_030841 [Vitis vinifera]
15 Hb_046609_010 0.3092324541 - - -
16 Hb_001486_110 0.3095479214 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor RAP2-11-like [Jatropha curcas]
17 Hb_073171_060 0.3104891335 - - Histidine-containing phosphotransfer protein, putative [Ricinus communis]
18 Hb_006920_050 0.312643762 - - endo-1,4-beta-glucanase [Vigna radiata var. radiata]
19 Hb_000055_100 0.3135677848 - - polyprotein [Oryza australiensis]
20 Hb_000368_130 0.3137664735 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_016777_030 Hb_016777_030 Hb_000705_330 Hb_000705_330 Hb_016777_030--Hb_000705_330 Hb_002053_040 Hb_002053_040 Hb_016777_030--Hb_002053_040 Hb_043999_010 Hb_043999_010 Hb_016777_030--Hb_043999_010 Hb_007765_090 Hb_007765_090 Hb_016777_030--Hb_007765_090 Hb_001105_060 Hb_001105_060 Hb_016777_030--Hb_001105_060 Hb_000809_150 Hb_000809_150 Hb_016777_030--Hb_000809_150 Hb_000705_330--Hb_002053_040 Hb_168855_010 Hb_168855_010 Hb_000705_330--Hb_168855_010 Hb_165085_010 Hb_165085_010 Hb_000705_330--Hb_165085_010 Hb_142295_010 Hb_142295_010 Hb_000705_330--Hb_142295_010 Hb_092416_010 Hb_092416_010 Hb_000705_330--Hb_092416_010 Hb_002053_040--Hb_168855_010 Hb_004885_020 Hb_004885_020 Hb_002053_040--Hb_004885_020 Hb_012103_010 Hb_012103_010 Hb_002053_040--Hb_012103_010 Hb_004246_010 Hb_004246_010 Hb_002053_040--Hb_004246_010 Hb_043999_010--Hb_007765_090 Hb_131621_010 Hb_131621_010 Hb_043999_010--Hb_131621_010 Hb_043999_010--Hb_001105_060 Hb_043999_010--Hb_000809_150 Hb_000252_230 Hb_000252_230 Hb_043999_010--Hb_000252_230 Hb_001486_110 Hb_001486_110 Hb_043999_010--Hb_001486_110 Hb_007765_090--Hb_131621_010 Hb_007765_090--Hb_001105_060 Hb_007765_090--Hb_000809_150 Hb_007765_090--Hb_001486_110 Hb_007765_090--Hb_000252_230 Hb_001105_060--Hb_000809_150 Hb_001105_060--Hb_000252_230 Hb_001105_060--Hb_131621_010 Hb_001105_060--Hb_001486_110 Hb_000809_150--Hb_000252_230 Hb_000809_150--Hb_131621_010 Hb_000809_150--Hb_001486_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.0193778 0 0 0.0753903
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0187943 0

CAGE analysis