Hb_168855_010

Information

Type -
Description -
Location Contig168855: 3693-12751
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_168855_010 0.0 - - -
2 Hb_000022_210 0.2089343501 - - PREDICTED: uncharacterized protein LOC105638395 [Jatropha curcas]
3 Hb_009398_010 0.2115175178 - - Putative pectate lyase 2 [Glycine soja]
4 Hb_002289_030 0.2117202384 - - PREDICTED: uncharacterized protein LOC103957017 [Pyrus x bretschneideri]
5 Hb_005204_060 0.2131906066 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
6 Hb_002094_060 0.2134302134 - - -
7 Hb_184964_010 0.2136251531 - - -
8 Hb_004324_140 0.2137735556 - - PREDICTED: uncharacterized protein LOC105648358 [Jatropha curcas]
9 Hb_000905_020 0.2144505279 - - PREDICTED: cytochrome P450 93A2-like [Jatropha curcas]
10 Hb_005316_010 0.2166956942 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
11 Hb_000383_030 0.2167472175 - - -
12 Hb_005389_180 0.2172597282 - - PREDICTED: uncharacterized protein LOC105762407 [Gossypium raimondii]
13 Hb_002671_070 0.2245008484 - - hypothetical protein POPTR_0006s05220g, partial [Populus trichocarpa]
14 Hb_005946_130 0.2245008484 - - -
15 Hb_001048_120 0.2251625028 - - Rhicadhesin receptor precursor, putative [Ricinus communis]
16 Hb_009659_060 0.226211178 - - cell wall invertase [Manihot esculenta]
17 Hb_070810_010 0.226534355 - - hypothetical protein CICLE_v10033628mg, partial [Citrus clementina]
18 Hb_005625_030 0.2265981144 - - ribosomal protein S12 (mitochondrion) [Chrysobalanus icaco]
19 Hb_002659_020 0.2269784527 - - PREDICTED: cytochrome P450 714C2-like [Populus euphratica]
20 Hb_000705_320 0.2277673418 - - Transcriptional regulator SUPERMAN, putative [Ricinus communis]

Gene co-expression network

sample Hb_168855_010 Hb_168855_010 Hb_000022_210 Hb_000022_210 Hb_168855_010--Hb_000022_210 Hb_009398_010 Hb_009398_010 Hb_168855_010--Hb_009398_010 Hb_002289_030 Hb_002289_030 Hb_168855_010--Hb_002289_030 Hb_005204_060 Hb_005204_060 Hb_168855_010--Hb_005204_060 Hb_002094_060 Hb_002094_060 Hb_168855_010--Hb_002094_060 Hb_184964_010 Hb_184964_010 Hb_168855_010--Hb_184964_010 Hb_000022_210--Hb_009398_010 Hb_000022_210--Hb_002289_030 Hb_000022_210--Hb_005204_060 Hb_000022_210--Hb_002094_060 Hb_000022_210--Hb_184964_010 Hb_004324_140 Hb_004324_140 Hb_000022_210--Hb_004324_140 Hb_009398_010--Hb_002289_030 Hb_009398_010--Hb_005204_060 Hb_009398_010--Hb_002094_060 Hb_009398_010--Hb_184964_010 Hb_009398_010--Hb_004324_140 Hb_000905_020 Hb_000905_020 Hb_009398_010--Hb_000905_020 Hb_002289_030--Hb_005204_060 Hb_002289_030--Hb_002094_060 Hb_002289_030--Hb_184964_010 Hb_002289_030--Hb_004324_140 Hb_002289_030--Hb_000905_020 Hb_005204_060--Hb_002094_060 Hb_005204_060--Hb_184964_010 Hb_005204_060--Hb_004324_140 Hb_005204_060--Hb_000905_020 Hb_002094_060--Hb_184964_010 Hb_002094_060--Hb_004324_140 Hb_002094_060--Hb_000905_020 Hb_184964_010--Hb_004324_140 Hb_184964_010--Hb_000905_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.0772587 0 0 0.0181797
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.119436 0

CAGE analysis