Hb_000905_020

Information

Type -
Description -
Location Contig905: 6188-6766
Sequence    

Annotation

kegg
ID cmo:103500382
description cytochrome P450 93A1-like
nr
ID XP_012065669.1
description PREDICTED: cytochrome P450 93A2-like [Jatropha curcas]
swissprot
ID Q42798
description 3,9-dihydroxypterocarpan 6A-monooxygenase OS=Glycine max GN=CYP93A1 PE=1 SV=1
trembl
ID F6HBA6
description Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0064g01320 PE=3 SV=1
Gene Ontology
ID GO:0005506
description cytochrome p450 705a5-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000905_020 0.0 - - PREDICTED: cytochrome P450 93A2-like [Jatropha curcas]
2 Hb_004324_140 0.0031692592 - - PREDICTED: uncharacterized protein LOC105648358 [Jatropha curcas]
3 Hb_184964_010 0.0038920005 - - -
4 Hb_002094_060 0.0048583642 - - -
5 Hb_005204_060 0.0060743321 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
6 Hb_000383_030 0.0095585528 - - -
7 Hb_005389_180 0.0115000712 - - PREDICTED: uncharacterized protein LOC105762407 [Gossypium raimondii]
8 Hb_002289_030 0.0144101607 - - PREDICTED: uncharacterized protein LOC103957017 [Pyrus x bretschneideri]
9 Hb_009398_010 0.0157151338 - - Putative pectate lyase 2 [Glycine soja]
10 Hb_009659_060 0.039285958 - - cell wall invertase [Manihot esculenta]
11 Hb_002659_020 0.0413166945 - - PREDICTED: cytochrome P450 714C2-like [Populus euphratica]
12 Hb_000022_210 0.0509326602 - - PREDICTED: uncharacterized protein LOC105638395 [Jatropha curcas]
13 Hb_004162_310 0.0663496322 - - tonoplast intrinsic protein, putative [Ricinus communis]
14 Hb_007320_050 0.0726800377 - - PREDICTED: uncharacterized protein LOC105637288 [Jatropha curcas]
15 Hb_014749_010 0.0802410824 - - hypothetical protein JCGZ_26951 [Jatropha curcas]
16 Hb_005316_010 0.1081390931 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
17 Hb_000560_050 0.1199793361 - - hypothetical protein JCGZ_05738 [Jatropha curcas]
18 Hb_038135_010 0.1324256068 transcription factor TF Family: C2H2 Transcriptional regulator SUPERMAN, putative [Ricinus communis]
19 Hb_002671_070 0.133279877 - - hypothetical protein POPTR_0006s05220g, partial [Populus trichocarpa]
20 Hb_005946_130 0.133279877 - - -

Gene co-expression network

sample Hb_000905_020 Hb_000905_020 Hb_004324_140 Hb_004324_140 Hb_000905_020--Hb_004324_140 Hb_184964_010 Hb_184964_010 Hb_000905_020--Hb_184964_010 Hb_002094_060 Hb_002094_060 Hb_000905_020--Hb_002094_060 Hb_005204_060 Hb_005204_060 Hb_000905_020--Hb_005204_060 Hb_000383_030 Hb_000383_030 Hb_000905_020--Hb_000383_030 Hb_005389_180 Hb_005389_180 Hb_000905_020--Hb_005389_180 Hb_004324_140--Hb_184964_010 Hb_004324_140--Hb_002094_060 Hb_004324_140--Hb_005204_060 Hb_002289_030 Hb_002289_030 Hb_004324_140--Hb_002289_030 Hb_009398_010 Hb_009398_010 Hb_004324_140--Hb_009398_010 Hb_184964_010--Hb_002094_060 Hb_184964_010--Hb_005204_060 Hb_184964_010--Hb_002289_030 Hb_184964_010--Hb_009398_010 Hb_002094_060--Hb_005204_060 Hb_002094_060--Hb_002289_030 Hb_002094_060--Hb_009398_010 Hb_005204_060--Hb_002289_030 Hb_005204_060--Hb_009398_010 Hb_000383_030--Hb_005389_180 Hb_000383_030--Hb_004324_140 Hb_000383_030--Hb_184964_010 Hb_000383_030--Hb_002094_060 Hb_000383_030--Hb_005204_060 Hb_005389_180--Hb_004324_140 Hb_005389_180--Hb_184964_010 Hb_005389_180--Hb_002094_060 Hb_005389_180--Hb_005204_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.034939 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0688107 0

CAGE analysis