Hb_012103_010

Information

Type -
Description -
Location Contig12103: 1476-6129
Sequence    

Annotation

kegg
ID tcc:TCM_031297
description 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase
nr
ID XP_007021244.1
description 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase [Theobroma cacao]
swissprot
ID -
description -
trembl
ID A0A061FE68
description 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase OS=Theobroma cacao GN=TCM_031297 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_012103_010 0.0 - - 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase [Theobroma cacao]
2 Hb_000248_120 0.2571998673 - - PREDICTED: uncharacterized protein LOC104107451 [Nicotiana tomentosiformis]
3 Hb_000191_160 0.2927868889 - - hypothetical protein EUGRSUZ_C03547 [Eucalyptus grandis]
4 Hb_007223_020 0.2940500347 - - PREDICTED: probable inorganic phosphate transporter 1-3 [Jatropha curcas]
5 Hb_003238_010 0.2962295142 - - PREDICTED: uncharacterized protein LOC104880636 [Vitis vinifera]
6 Hb_004885_020 0.3098836747 - - PREDICTED: 2-alkenal reductase (NADP(+)-dependent)-like isoform X1 [Jatropha curcas]
7 Hb_003780_040 0.3194719364 - - PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus sinensis]
8 Hb_000668_120 0.3213247034 - - hypothetical protein JCGZ_11991 [Jatropha curcas]
9 Hb_007527_030 0.3300972424 - - -
10 Hb_002450_150 0.3364720022 - - ATP binding protein, putative [Ricinus communis]
11 Hb_183612_020 0.3373649906 - - PREDICTED: small heat shock protein, chloroplastic-like [Nelumbo nucifera]
12 Hb_006920_050 0.3397518587 - - endo-1,4-beta-glucanase [Vigna radiata var. radiata]
13 Hb_059295_010 0.340683106 - - hypothetical protein CICLE_v10032980mg [Citrus clementina]
14 Hb_002053_040 0.3443670039 - - PREDICTED: AT-hook motif nuclear-localized protein 24 [Jatropha curcas]
15 Hb_000705_330 0.3470604532 transcription factor TF Family: C2H2 Transcriptional regulator SUPERMAN, putative [Ricinus communis]
16 Hb_101393_010 0.3473372798 - - conserved hypothetical protein [Ricinus communis]
17 Hb_002837_100 0.3517547223 - - PREDICTED: F-box protein PP2-B15-like [Jatropha curcas]
18 Hb_001032_040 0.3606190842 - - PREDICTED: psbP-like protein 1, chloroplastic [Jatropha curcas]
19 Hb_001890_030 0.3626659633 - - -
20 Hb_011224_090 0.3635312523 - - PREDICTED: ABC transporter G family member 26 [Jatropha curcas]

Gene co-expression network

sample Hb_012103_010 Hb_012103_010 Hb_000248_120 Hb_000248_120 Hb_012103_010--Hb_000248_120 Hb_000191_160 Hb_000191_160 Hb_012103_010--Hb_000191_160 Hb_007223_020 Hb_007223_020 Hb_012103_010--Hb_007223_020 Hb_003238_010 Hb_003238_010 Hb_012103_010--Hb_003238_010 Hb_004885_020 Hb_004885_020 Hb_012103_010--Hb_004885_020 Hb_003780_040 Hb_003780_040 Hb_012103_010--Hb_003780_040 Hb_000407_060 Hb_000407_060 Hb_000248_120--Hb_000407_060 Hb_000175_550 Hb_000175_550 Hb_000248_120--Hb_000175_550 Hb_111834_020 Hb_111834_020 Hb_000248_120--Hb_111834_020 Hb_000248_120--Hb_003238_010 Hb_000701_070 Hb_000701_070 Hb_000248_120--Hb_000701_070 Hb_006920_040 Hb_006920_040 Hb_000191_160--Hb_006920_040 Hb_003025_010 Hb_003025_010 Hb_000191_160--Hb_003025_010 Hb_006054_020 Hb_006054_020 Hb_000191_160--Hb_006054_020 Hb_004102_050 Hb_004102_050 Hb_000191_160--Hb_004102_050 Hb_007527_030 Hb_007527_030 Hb_000191_160--Hb_007527_030 Hb_002553_100 Hb_002553_100 Hb_000191_160--Hb_002553_100 Hb_183612_020 Hb_183612_020 Hb_007223_020--Hb_183612_020 Hb_001829_030 Hb_001829_030 Hb_007223_020--Hb_001829_030 Hb_008147_110 Hb_008147_110 Hb_007223_020--Hb_008147_110 Hb_105478_010 Hb_105478_010 Hb_007223_020--Hb_105478_010 Hb_001396_060 Hb_001396_060 Hb_007223_020--Hb_001396_060 Hb_000019_090 Hb_000019_090 Hb_007223_020--Hb_000019_090 Hb_147996_010 Hb_147996_010 Hb_003238_010--Hb_147996_010 Hb_003238_010--Hb_000407_060 Hb_000915_150 Hb_000915_150 Hb_003238_010--Hb_000915_150 Hb_003238_010--Hb_000175_550 Hb_002311_460 Hb_002311_460 Hb_004885_020--Hb_002311_460 Hb_004885_020--Hb_000191_160 Hb_000078_160 Hb_000078_160 Hb_004885_020--Hb_000078_160 Hb_154381_010 Hb_154381_010 Hb_004885_020--Hb_154381_010 Hb_003551_040 Hb_003551_040 Hb_004885_020--Hb_003551_040 Hb_004885_020--Hb_003025_010 Hb_009164_020 Hb_009164_020 Hb_003780_040--Hb_009164_020 Hb_000340_070 Hb_000340_070 Hb_003780_040--Hb_000340_070 Hb_000604_080 Hb_000604_080 Hb_003780_040--Hb_000604_080 Hb_000574_270 Hb_000574_270 Hb_003780_040--Hb_000574_270 Hb_000170_080 Hb_000170_080 Hb_003780_040--Hb_000170_080 Hb_000668_120 Hb_000668_120 Hb_003780_040--Hb_000668_120
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.074563 1.48386 17.8552 1.97591 0 11.9523
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 6.52138 0

CAGE analysis