Hb_000191_160

Information

Type -
Description -
Location Contig191: 245317-247615
Sequence    

Annotation

kegg
ID cvr:CHLNCDRAFT_52565
description hypothetical protein
nr
ID KCW82153.1
description hypothetical protein EUGRSUZ_C03547 [Eucalyptus grandis]
swissprot
ID Q9FUP0
description 12-oxophytodienoate reductase 3 OS=Arabidopsis thaliana GN=OPR3 PE=1 SV=2
trembl
ID A0A059CUK0
description Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_C03547 PE=4 SV=1
Gene Ontology
ID GO:0003824
description 12-oxophytodienoate reductase 11

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000191_160 0.0 - - hypothetical protein EUGRSUZ_C03547 [Eucalyptus grandis]
2 Hb_006920_040 0.2256826232 - - PREDICTED: uncharacterized protein LOC103341644 [Prunus mume]
3 Hb_003025_010 0.2264502447 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570 isoform X2 [Populus euphratica]
4 Hb_006054_020 0.241827193 - - conserved hypothetical protein [Ricinus communis]
5 Hb_004102_050 0.2515511639 - - JHL25H03.10 [Jatropha curcas]
6 Hb_007527_030 0.2612762248 - - -
7 Hb_002553_100 0.2664133436 transcription factor TF Family: ERF Ethylene-responsive transcription factor [Morus notabilis]
8 Hb_004885_020 0.2742063899 - - PREDICTED: 2-alkenal reductase (NADP(+)-dependent)-like isoform X1 [Jatropha curcas]
9 Hb_004703_010 0.2786442384 - - PREDICTED: cytochrome P450 81E8-like [Jatropha curcas]
10 Hb_001288_020 0.2818215466 - - -
11 Hb_001532_060 0.2827138108 - - S-adenosylmethionine-dependent methyltransferase, putative [Ricinus communis]
12 Hb_003413_020 0.2846128299 - - -
13 Hb_008554_090 0.285027503 - - zinc finger protein, putative [Ricinus communis]
14 Hb_111985_120 0.2869939518 - - dihydroflavonol-4-reductase [Vitis rotundifolia]
15 Hb_000220_170 0.2872266297 - - -
16 Hb_001789_010 0.287377874 - - hypothetical protein POPTR_0015s13020g [Populus trichocarpa]
17 Hb_042083_060 0.2882591059 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At5g45780 [Jatropha curcas]
18 Hb_002603_030 0.2917110371 - - Nodulation receptor kinase precursor, putative [Ricinus communis]
19 Hb_012103_010 0.2927868889 - - 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase [Theobroma cacao]
20 Hb_002157_100 0.2956495834 - - -

Gene co-expression network

sample Hb_000191_160 Hb_000191_160 Hb_006920_040 Hb_006920_040 Hb_000191_160--Hb_006920_040 Hb_003025_010 Hb_003025_010 Hb_000191_160--Hb_003025_010 Hb_006054_020 Hb_006054_020 Hb_000191_160--Hb_006054_020 Hb_004102_050 Hb_004102_050 Hb_000191_160--Hb_004102_050 Hb_007527_030 Hb_007527_030 Hb_000191_160--Hb_007527_030 Hb_002553_100 Hb_002553_100 Hb_000191_160--Hb_002553_100 Hb_008554_090 Hb_008554_090 Hb_006920_040--Hb_008554_090 Hb_000424_100 Hb_000424_100 Hb_006920_040--Hb_000424_100 Hb_001345_010 Hb_001345_010 Hb_006920_040--Hb_001345_010 Hb_002110_060 Hb_002110_060 Hb_006920_040--Hb_002110_060 Hb_011472_020 Hb_011472_020 Hb_006920_040--Hb_011472_020 Hb_150730_010 Hb_150730_010 Hb_006920_040--Hb_150730_010 Hb_003025_010--Hb_006054_020 Hb_001921_020 Hb_001921_020 Hb_003025_010--Hb_001921_020 Hb_003025_010--Hb_004102_050 Hb_048476_010 Hb_048476_010 Hb_003025_010--Hb_048476_010 Hb_080147_060 Hb_080147_060 Hb_003025_010--Hb_080147_060 Hb_006054_020--Hb_004102_050 Hb_006054_020--Hb_001921_020 Hb_046417_010 Hb_046417_010 Hb_006054_020--Hb_046417_010 Hb_001486_140 Hb_001486_140 Hb_006054_020--Hb_001486_140 Hb_004102_050--Hb_007527_030 Hb_004102_050--Hb_001486_140 Hb_011377_010 Hb_011377_010 Hb_004102_050--Hb_011377_010 Hb_012052_030 Hb_012052_030 Hb_007527_030--Hb_012052_030 Hb_007527_030--Hb_006054_020 Hb_007527_030--Hb_001486_140 Hb_002837_100 Hb_002837_100 Hb_007527_030--Hb_002837_100 Hb_000220_170 Hb_000220_170 Hb_002553_100--Hb_000220_170 Hb_001789_010 Hb_001789_010 Hb_002553_100--Hb_001789_010 Hb_111985_120 Hb_111985_120 Hb_002553_100--Hb_111985_120 Hb_111693_010 Hb_111693_010 Hb_002553_100--Hb_111693_010 Hb_001006_200 Hb_001006_200 Hb_002553_100--Hb_001006_200 Hb_174514_010 Hb_174514_010 Hb_002553_100--Hb_174514_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0839112 0.204782 0.0496466 0 0.079874
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.235077 0

CAGE analysis