Hb_007223_020

Information

Type -
Description -
Location Contig7223: 33432-35072
Sequence    

Annotation

kegg
ID rcu:RCOM_0690210
description inorganic phosphate transporter, putative
nr
ID XP_012091213.1
description PREDICTED: probable inorganic phosphate transporter 1-3 [Jatropha curcas]
swissprot
ID Q94DB8
description Inorganic phosphate transporter 1-11 OS=Oryza sativa subsp. japonica GN=PHT1-11 PE=2 SV=1
trembl
ID A0A067JQ31
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03295 PE=4 SV=1
Gene Ontology
ID GO:0016021
description probable inorganic phosphate transporter 1-3

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007223_020 0.0 - - PREDICTED: probable inorganic phosphate transporter 1-3 [Jatropha curcas]
2 Hb_183612_020 0.2148733789 - - PREDICTED: small heat shock protein, chloroplastic-like [Nelumbo nucifera]
3 Hb_001829_030 0.2459843138 - - PREDICTED: uncharacterized protein LOC105119087 [Populus euphratica]
4 Hb_008147_110 0.249773453 - - PREDICTED: phenolic glucoside malonyltransferase 1-like [Jatropha curcas]
5 Hb_105478_010 0.2541915973 - - PREDICTED: uncharacterized protein LOC105762101 [Gossypium raimondii]
6 Hb_001396_060 0.2562332383 - - conserved hypothetical protein [Ricinus communis]
7 Hb_000019_090 0.2686780629 - - PREDICTED: thioredoxin H4-1-like [Jatropha curcas]
8 Hb_057597_020 0.2706014362 - - PREDICTED: anti-H(O) lectin-like [Gossypium raimondii]
9 Hb_002450_150 0.281075865 - - ATP binding protein, putative [Ricinus communis]
10 Hb_059295_010 0.2844649416 - - hypothetical protein CICLE_v10032980mg [Citrus clementina]
11 Hb_003209_180 0.2918474654 - - Alpha-1,4 glucan phosphorylase L-2 isozyme [Morus notabilis]
12 Hb_003053_040 0.2925754811 desease resistance Gene Name: NB-ARC conserved hypothetical protein [Ricinus communis]
13 Hb_012103_010 0.2940500347 - - 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase [Theobroma cacao]
14 Hb_001249_040 0.2950275048 - - PREDICTED: uncharacterized protein LOC105641067 [Jatropha curcas]
15 Hb_000816_070 0.2980062631 - - conserved hypothetical protein [Ricinus communis]
16 Hb_003462_130 0.3017478833 - - -
17 Hb_152598_010 0.302722804 - - PREDICTED: uncharacterized protein LOC104115096 [Nicotiana tomentosiformis]
18 Hb_009164_020 0.3033400893 - - hypothetical protein PRUPE_ppa026212mg, partial [Prunus persica]
19 Hb_103586_010 0.3033503367 - - PREDICTED: serine/threonine-protein phosphatase 7 long form homolog [Glycine max]
20 Hb_158845_020 0.3086353418 transcription factor TF Family: TUB PREDICTED: tubby-like protein 8 [Jatropha curcas]

Gene co-expression network

sample Hb_007223_020 Hb_007223_020 Hb_183612_020 Hb_183612_020 Hb_007223_020--Hb_183612_020 Hb_001829_030 Hb_001829_030 Hb_007223_020--Hb_001829_030 Hb_008147_110 Hb_008147_110 Hb_007223_020--Hb_008147_110 Hb_105478_010 Hb_105478_010 Hb_007223_020--Hb_105478_010 Hb_001396_060 Hb_001396_060 Hb_007223_020--Hb_001396_060 Hb_000019_090 Hb_000019_090 Hb_007223_020--Hb_000019_090 Hb_000574_520 Hb_000574_520 Hb_183612_020--Hb_000574_520 Hb_002450_150 Hb_002450_150 Hb_183612_020--Hb_002450_150 Hb_007416_380 Hb_007416_380 Hb_183612_020--Hb_007416_380 Hb_059295_010 Hb_059295_010 Hb_183612_020--Hb_059295_010 Hb_141199_010 Hb_141199_010 Hb_183612_020--Hb_141199_010 Hb_183612_020--Hb_001829_030 Hb_001829_030--Hb_008147_110 Hb_001829_030--Hb_105478_010 Hb_001829_030--Hb_001396_060 Hb_001829_030--Hb_000019_090 Hb_057597_020 Hb_057597_020 Hb_001829_030--Hb_057597_020 Hb_003053_040 Hb_003053_040 Hb_001829_030--Hb_003053_040 Hb_008147_110--Hb_105478_010 Hb_008147_110--Hb_001396_060 Hb_008147_110--Hb_003053_040 Hb_003462_130 Hb_003462_130 Hb_008147_110--Hb_003462_130 Hb_008147_110--Hb_000019_090 Hb_105478_010--Hb_003053_040 Hb_105478_010--Hb_003462_130 Hb_005357_190 Hb_005357_190 Hb_105478_010--Hb_005357_190 Hb_001217_030 Hb_001217_030 Hb_105478_010--Hb_001217_030 Hb_001396_060--Hb_000019_090 Hb_001396_060--Hb_057597_020 Hb_001396_060--Hb_105478_010 Hb_001396_060--Hb_183612_020 Hb_000019_090--Hb_057597_020 Hb_000019_090--Hb_105478_010 Hb_000172_500 Hb_000172_500 Hb_000019_090--Hb_000172_500
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.0552225 0 0 0.0122248
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.00883931 0

CAGE analysis