Hb_000809_150

Information

Type -
Description -
Location Contig809: 127562-129077
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000809_150 0.0 - - -
2 Hb_001105_060 0.0024418991 - - hypothetical protein CISIN_1g0045352mg, partial [Citrus sinensis]
3 Hb_000252_230 0.027171784 - - hypothetical protein B456_008G160800 [Gossypium raimondii]
4 Hb_043999_010 0.0462127203 - - PREDICTED: uncharacterized protein LOC105629587 [Jatropha curcas]
5 Hb_007765_090 0.0480838083 - - unknown [Glycine max]
6 Hb_131621_010 0.0726970919 - - hypothetical protein MIMGU_mgv1a004274mg [Erythranthe guttata]
7 Hb_001486_110 0.1210945841 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor RAP2-11-like [Jatropha curcas]
8 Hb_002540_040 0.1703106774 - - BnaC05g39550D [Brassica napus]
9 Hb_004021_110 0.1964522238 - - -
10 Hb_032419_020 0.2603929939 - - PREDICTED: trihelix transcription factor ASIL2 [Jatropha curcas]
11 Hb_000705_310 0.260628228 - - hypothetical protein POPTR_0001s03390g [Populus trichocarpa]
12 Hb_001631_120 0.2616126887 - - unnamed protein product [Vitis vinifera]
13 Hb_000105_090 0.2628293838 - - -
14 Hb_002805_080 0.2645392554 - - PREDICTED: E3 ubiquitin ligase BIG BROTHER-like [Jatropha curcas]
15 Hb_003384_050 0.2702715353 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
16 Hb_000089_230 0.271325285 - - PREDICTED: uncharacterized protein LOC105772114 [Gossypium raimondii]
17 Hb_057486_010 0.2715253174 - - PREDICTED: uncharacterized protein LOC105793230 [Gossypium raimondii]
18 Hb_000290_010 0.2858655639 - - -
19 Hb_002307_060 0.2887418885 - - -
20 Hb_001439_030 0.2966095186 - - -

Gene co-expression network

sample Hb_000809_150 Hb_000809_150 Hb_001105_060 Hb_001105_060 Hb_000809_150--Hb_001105_060 Hb_000252_230 Hb_000252_230 Hb_000809_150--Hb_000252_230 Hb_043999_010 Hb_043999_010 Hb_000809_150--Hb_043999_010 Hb_007765_090 Hb_007765_090 Hb_000809_150--Hb_007765_090 Hb_131621_010 Hb_131621_010 Hb_000809_150--Hb_131621_010 Hb_001486_110 Hb_001486_110 Hb_000809_150--Hb_001486_110 Hb_001105_060--Hb_000252_230 Hb_001105_060--Hb_043999_010 Hb_001105_060--Hb_007765_090 Hb_001105_060--Hb_131621_010 Hb_001105_060--Hb_001486_110 Hb_000252_230--Hb_043999_010 Hb_000252_230--Hb_007765_090 Hb_000252_230--Hb_131621_010 Hb_000252_230--Hb_001486_110 Hb_043999_010--Hb_007765_090 Hb_043999_010--Hb_131621_010 Hb_043999_010--Hb_001486_110 Hb_007765_090--Hb_131621_010 Hb_007765_090--Hb_001486_110 Hb_131621_010--Hb_001486_110 Hb_004021_110 Hb_004021_110 Hb_001486_110--Hb_004021_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.0484243 0 0 0.224541
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis