Hb_000222_030

Information

Type -
Description -
Location Contig222: 132460-132684
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000222_030 0.0 - - -
2 Hb_001946_350 0.2927901695 - - PREDICTED: uncharacterized protein LOC105639338 [Jatropha curcas]
3 Hb_000926_100 0.2990244085 - - hypothetical protein B456_007G076800 [Gossypium raimondii]
4 Hb_138710_010 0.3115921839 - - Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Gossypium arboreum]
5 Hb_000120_720 0.3150197208 transcription factor TF Family: HB homeobox-leucine zipper family protein [Populus trichocarpa]
6 Hb_002685_150 0.3174995783 - - PREDICTED: 2-aminoethanethiol dioxygenase-like [Jatropha curcas]
7 Hb_001390_030 0.3182828667 - - PREDICTED: receptor-like protein kinase HAIKU2 [Jatropha curcas]
8 Hb_001635_150 0.3259741103 - - hypothetical protein JCGZ_24809 [Jatropha curcas]
9 Hb_001946_220 0.3261204568 - - PREDICTED: signal peptidase complex catalytic subunit SEC11A-like [Jatropha curcas]
10 Hb_000094_240 0.3267155111 - - PREDICTED: uncharacterized protein LOC105633775 [Jatropha curcas]
11 Hb_001591_010 0.3308587883 transcription factor TF Family: MYB myb domain protein [Hevea brasiliensis]
12 Hb_000457_210 0.3353495377 - - PREDICTED: kelch repeat-containing protein At3g27220-like [Jatropha curcas]
13 Hb_000320_300 0.336173333 - - prephenate dehydratase, putative [Ricinus communis]
14 Hb_000088_220 0.3388025871 transcription factor TF Family: zf-HD transcription factor, putative [Ricinus communis]
15 Hb_000614_170 0.3397490465 - - Glyceraldehyde-3-phosphate dehydrogenase-2C cytosolic [Gossypium arboreum]
16 Hb_003464_030 0.3403451362 - - PREDICTED: 60S ribosomal protein L24-like [Jatropha curcas]
17 Hb_005062_080 0.3444016071 - - MLO-like protein 4 [Gossypium arboreum]
18 Hb_007919_020 0.3450314856 - - electron transporter, putative [Ricinus communis]
19 Hb_143629_070 0.3451619605 - - PREDICTED: uncharacterized protein LOC105647357 [Jatropha curcas]
20 Hb_003680_210 0.3478698021 transcription factor TF Family: Trihelix PREDICTED: stress response protein NST1 [Jatropha curcas]

Gene co-expression network

sample Hb_000222_030 Hb_000222_030 Hb_001946_350 Hb_001946_350 Hb_000222_030--Hb_001946_350 Hb_000926_100 Hb_000926_100 Hb_000222_030--Hb_000926_100 Hb_138710_010 Hb_138710_010 Hb_000222_030--Hb_138710_010 Hb_000120_720 Hb_000120_720 Hb_000222_030--Hb_000120_720 Hb_002685_150 Hb_002685_150 Hb_000222_030--Hb_002685_150 Hb_001390_030 Hb_001390_030 Hb_000222_030--Hb_001390_030 Hb_005725_200 Hb_005725_200 Hb_001946_350--Hb_005725_200 Hb_000215_370 Hb_000215_370 Hb_001946_350--Hb_000215_370 Hb_000025_170 Hb_000025_170 Hb_001946_350--Hb_000025_170 Hb_000088_220 Hb_000088_220 Hb_001946_350--Hb_000088_220 Hb_005725_150 Hb_005725_150 Hb_001946_350--Hb_005725_150 Hb_003399_100 Hb_003399_100 Hb_001946_350--Hb_003399_100 Hb_000450_160 Hb_000450_160 Hb_000926_100--Hb_000450_160 Hb_001623_090 Hb_001623_090 Hb_000926_100--Hb_001623_090 Hb_003972_060 Hb_003972_060 Hb_000926_100--Hb_003972_060 Hb_029921_030 Hb_029921_030 Hb_000926_100--Hb_029921_030 Hb_002998_070 Hb_002998_070 Hb_000926_100--Hb_002998_070 Hb_003680_210 Hb_003680_210 Hb_000926_100--Hb_003680_210 Hb_138710_010--Hb_001390_030 Hb_094437_060 Hb_094437_060 Hb_138710_010--Hb_094437_060 Hb_004079_080 Hb_004079_080 Hb_138710_010--Hb_004079_080 Hb_001332_040 Hb_001332_040 Hb_138710_010--Hb_001332_040 Hb_000805_320 Hb_000805_320 Hb_138710_010--Hb_000805_320 Hb_003226_120 Hb_003226_120 Hb_138710_010--Hb_003226_120 Hb_000320_300 Hb_000320_300 Hb_000120_720--Hb_000320_300 Hb_001946_220 Hb_001946_220 Hb_000120_720--Hb_001946_220 Hb_172112_020 Hb_172112_020 Hb_000120_720--Hb_172112_020 Hb_003266_100 Hb_003266_100 Hb_000120_720--Hb_003266_100 Hb_007185_040 Hb_007185_040 Hb_000120_720--Hb_007185_040 Hb_001369_300 Hb_001369_300 Hb_000120_720--Hb_001369_300 Hb_000317_160 Hb_000317_160 Hb_002685_150--Hb_000317_160 Hb_003464_070 Hb_003464_070 Hb_002685_150--Hb_003464_070 Hb_005725_230 Hb_005725_230 Hb_002685_150--Hb_005725_230 Hb_009615_020 Hb_009615_020 Hb_002685_150--Hb_009615_020 Hb_027746_020 Hb_027746_020 Hb_002685_150--Hb_027746_020 Hb_000023_160 Hb_000023_160 Hb_002685_150--Hb_000023_160 Hb_011633_040 Hb_011633_040 Hb_001390_030--Hb_011633_040 Hb_003813_120 Hb_003813_120 Hb_001390_030--Hb_003813_120 Hb_012545_090 Hb_012545_090 Hb_001390_030--Hb_012545_090 Hb_001390_030--Hb_029921_030 Hb_127886_010 Hb_127886_010 Hb_001390_030--Hb_127886_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
7.40697 0.524155 8.38576 4.13148 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.899412 6.47258 5.92978 13.529 0

CAGE analysis