Hb_005725_150

Information

Type -
Description -
Location Contig5725: 64337-71457
Sequence    

Annotation

kegg
ID rcu:RCOM_1586490
description ATP binding protein, putative
nr
ID XP_012068175.1
description PREDICTED: kinesin-related protein 11 isoform X1 [Jatropha curcas]
swissprot
ID Q6RT24
description Centromere-associated protein E OS=Mus musculus GN=Cenpe PE=1 SV=1
trembl
ID A0A067L2X9
description Kinesin-like protein OS=Jatropha curcas GN=JCGZ_15995 PE=3 SV=1
Gene Ontology
ID GO:0005871
description centromere-associated protein e-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_49410: 65653-66507 , PASA_asmbl_49411: 67162-68548
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005725_150 0.0 - - PREDICTED: kinesin-related protein 11 isoform X1 [Jatropha curcas]
2 Hb_000051_080 0.0884119591 - - PREDICTED: DNA (cytosine-5)-methyltransferase CMT3 [Jatropha curcas]
3 Hb_003784_040 0.1078658041 - - Afadin- and alpha-actinin-binding protein, putative [Ricinus communis]
4 Hb_010180_030 0.1103046004 - - PREDICTED: WEB family protein At2g38370-like [Jatropha curcas]
5 Hb_001478_020 0.1180729171 desease resistance Gene Name: AAA thyroid hormone receptor interactor, putative [Ricinus communis]
6 Hb_002007_040 0.1256717427 - - unnamed protein product [Coffea canephora]
7 Hb_006275_060 0.1344138216 - - hypothetical protein CARUB_v10021660mg, partial [Capsella rubella]
8 Hb_005504_040 0.1367630467 - - conserved hypothetical protein [Ricinus communis]
9 Hb_003399_100 0.1370699169 - - PREDICTED: putative cyclin-A3-1 [Jatropha curcas]
10 Hb_001890_020 0.1390353159 - - hypothetical protein CICLE_v10025198mg [Citrus clementina]
11 Hb_002007_280 0.1427800688 - - PREDICTED: kinesin-like protein KIFC3 [Jatropha curcas]
12 Hb_001780_080 0.145456697 - - PREDICTED: tubulin beta-2 chain [Jatropha curcas]
13 Hb_002307_020 0.1473428517 - - PREDICTED: histone H1-like [Jatropha curcas]
14 Hb_029510_130 0.1602494765 - - PREDICTED: malonate--CoA ligase [Jatropha curcas]
15 Hb_000139_280 0.1681157632 - - PREDICTED: mitogen-activated protein kinase kinase kinase NPK1 isoform X1 [Jatropha curcas]
16 Hb_001501_070 0.1687687909 - - PREDICTED: condensin complex subunit 2 [Jatropha curcas]
17 Hb_010998_050 0.1712071736 - - PREDICTED: kinesin-like protein KIF22 isoform X2 [Jatropha curcas]
18 Hb_011360_130 0.17895296 - - conserved hypothetical protein [Ricinus communis]
19 Hb_033594_040 0.178982734 - - PREDICTED: heptahelical transmembrane protein 4-like isoform X2 [Jatropha curcas]
20 Hb_000349_230 0.1816107033 - - PREDICTED: protein TPX2 [Jatropha curcas]

Gene co-expression network

sample Hb_005725_150 Hb_005725_150 Hb_000051_080 Hb_000051_080 Hb_005725_150--Hb_000051_080 Hb_003784_040 Hb_003784_040 Hb_005725_150--Hb_003784_040 Hb_010180_030 Hb_010180_030 Hb_005725_150--Hb_010180_030 Hb_001478_020 Hb_001478_020 Hb_005725_150--Hb_001478_020 Hb_002007_040 Hb_002007_040 Hb_005725_150--Hb_002007_040 Hb_006275_060 Hb_006275_060 Hb_005725_150--Hb_006275_060 Hb_000051_080--Hb_003784_040 Hb_000051_080--Hb_002007_040 Hb_002307_020 Hb_002307_020 Hb_000051_080--Hb_002307_020 Hb_000051_080--Hb_006275_060 Hb_000051_080--Hb_010180_030 Hb_005504_040 Hb_005504_040 Hb_003784_040--Hb_005504_040 Hb_003784_040--Hb_010180_030 Hb_000139_280 Hb_000139_280 Hb_003784_040--Hb_000139_280 Hb_003784_040--Hb_001478_020 Hb_001780_080 Hb_001780_080 Hb_003784_040--Hb_001780_080 Hb_010180_030--Hb_001478_020 Hb_001501_070 Hb_001501_070 Hb_010180_030--Hb_001501_070 Hb_010180_030--Hb_001780_080 Hb_010180_030--Hb_005504_040 Hb_001478_020--Hb_001501_070 Hb_038044_010 Hb_038044_010 Hb_001478_020--Hb_038044_010 Hb_001478_020--Hb_001780_080 Hb_029510_130 Hb_029510_130 Hb_001478_020--Hb_029510_130 Hb_002007_040--Hb_002307_020 Hb_002007_040--Hb_001478_020 Hb_002007_040--Hb_001501_070 Hb_002007_040--Hb_003784_040 Hb_006275_060--Hb_002307_020 Hb_000155_150 Hb_000155_150 Hb_006275_060--Hb_000155_150 Hb_002045_190 Hb_002045_190 Hb_006275_060--Hb_002045_190 Hb_006275_060--Hb_003784_040 Hb_003399_100 Hb_003399_100 Hb_006275_060--Hb_003399_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.23248 0.0945244 4.85133 1.62956 0.0925589 0.0514378
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.433838 0.455173 0.704718 0.412401 0.211543

CAGE analysis