Hb_000155_170

Information

Type transcription factor
Description TF Family: VOZ
Location Contig155: 277744-281917
Sequence    

Annotation

kegg
ID eus:EUTSA_v10007498mg
description hypothetical protein
nr
ID XP_006415642.1
description hypothetical protein EUTSA_v10007498mg [Eutrema salsugineum]
swissprot
ID Q9SGQ0
description Transcription factor VOZ1 OS=Arabidopsis thaliana GN=VOZ1 PE=1 SV=1
trembl
ID V4K8R3
description Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10007498mg PE=4 SV=1
Gene Ontology
ID GO:0005515
description transcription factor voz1-like isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_13442: 278278-281898
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000155_170 0.0 transcription factor TF Family: VOZ hypothetical protein EUTSA_v10007498mg [Eutrema salsugineum]
2 Hb_003913_020 0.0824829305 - - PREDICTED: C2 and GRAM domain-containing protein At5g50170 [Jatropha curcas]
3 Hb_001277_340 0.0833763695 - - aldo/keto reductase, putative [Ricinus communis]
4 Hb_009476_130 0.0860737012 - - hypothetical protein VITISV_005430 [Vitis vinifera]
5 Hb_087313_010 0.0864704079 - - conserved hypothetical protein [Ricinus communis]
6 Hb_017214_040 0.0947889313 - - PREDICTED: E3 ubiquitin-protein ligase COP1 isoform X1 [Jatropha curcas]
7 Hb_102948_010 0.0952007026 transcription factor TF Family: ARID PREDICTED: AT-rich interactive domain-containing protein 5 isoform X2 [Jatropha curcas]
8 Hb_006846_170 0.0957111696 - - PREDICTED: probable beta-1,4-xylosyltransferase IRX10L [Jatropha curcas]
9 Hb_003506_030 0.0987568536 - - PREDICTED: ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial isoform X2 [Jatropha curcas]
10 Hb_002218_020 0.098779201 - - PREDICTED: AT-hook motif nuclear-localized protein 14 [Jatropha curcas]
11 Hb_027905_020 0.0989569026 - - PREDICTED: uncharacterized protein LOC105642268 [Jatropha curcas]
12 Hb_009158_060 0.099187286 - - PREDICTED: CDPK-related kinase 3 [Jatropha curcas]
13 Hb_002600_070 0.0992515287 transcription factor TF Family: TAZ PREDICTED: histone acetyltransferase HAC12 [Jatropha curcas]
14 Hb_000300_030 0.0996743362 - - HIV-1 rev binding protein, hrbl, putative [Ricinus communis]
15 Hb_000179_190 0.0997574062 transcription factor TF Family: Alfin-like PREDICTED: PHD finger protein ALFIN-LIKE 4 isoform X1 [Vitis vinifera]
16 Hb_002249_020 0.1004604945 - - PREDICTED: dual specificity protein phosphatase PHS1 [Jatropha curcas]
17 Hb_004324_360 0.1016138177 - - PREDICTED: uncharacterized protein LOC105650600 isoform X1 [Jatropha curcas]
18 Hb_000291_180 0.1017636766 - - PREDICTED: meiotically up-regulated gene 185 protein [Jatropha curcas]
19 Hb_000788_030 0.1023972101 - - PREDICTED: dynamin-2A [Jatropha curcas]
20 Hb_005305_100 0.1024769604 transcription factor TF Family: NF-YA PREDICTED: nuclear transcription factor Y subunit A-1-like isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_000155_170 Hb_000155_170 Hb_003913_020 Hb_003913_020 Hb_000155_170--Hb_003913_020 Hb_001277_340 Hb_001277_340 Hb_000155_170--Hb_001277_340 Hb_009476_130 Hb_009476_130 Hb_000155_170--Hb_009476_130 Hb_087313_010 Hb_087313_010 Hb_000155_170--Hb_087313_010 Hb_017214_040 Hb_017214_040 Hb_000155_170--Hb_017214_040 Hb_102948_010 Hb_102948_010 Hb_000155_170--Hb_102948_010 Hb_002768_050 Hb_002768_050 Hb_003913_020--Hb_002768_050 Hb_003626_070 Hb_003626_070 Hb_003913_020--Hb_003626_070 Hb_033642_120 Hb_033642_120 Hb_003913_020--Hb_033642_120 Hb_002413_010 Hb_002413_010 Hb_003913_020--Hb_002413_010 Hb_000661_120 Hb_000661_120 Hb_003913_020--Hb_000661_120 Hb_000562_070 Hb_000562_070 Hb_001277_340--Hb_000562_070 Hb_002600_070 Hb_002600_070 Hb_001277_340--Hb_002600_070 Hb_009158_060 Hb_009158_060 Hb_001277_340--Hb_009158_060 Hb_005305_130 Hb_005305_130 Hb_001277_340--Hb_005305_130 Hb_003925_060 Hb_003925_060 Hb_001277_340--Hb_003925_060 Hb_000163_260 Hb_000163_260 Hb_009476_130--Hb_000163_260 Hb_113853_010 Hb_113853_010 Hb_009476_130--Hb_113853_010 Hb_012438_030 Hb_012438_030 Hb_009476_130--Hb_012438_030 Hb_000186_300 Hb_000186_300 Hb_009476_130--Hb_000186_300 Hb_001504_010 Hb_001504_010 Hb_009476_130--Hb_001504_010 Hb_087313_010--Hb_012438_030 Hb_002218_020 Hb_002218_020 Hb_087313_010--Hb_002218_020 Hb_001703_040 Hb_001703_040 Hb_087313_010--Hb_001703_040 Hb_000788_030 Hb_000788_030 Hb_087313_010--Hb_000788_030 Hb_087313_010--Hb_102948_010 Hb_004324_360 Hb_004324_360 Hb_087313_010--Hb_004324_360 Hb_000179_190 Hb_000179_190 Hb_017214_040--Hb_000179_190 Hb_008387_010 Hb_008387_010 Hb_017214_040--Hb_008387_010 Hb_023226_070 Hb_023226_070 Hb_017214_040--Hb_023226_070 Hb_000445_060 Hb_000445_060 Hb_017214_040--Hb_000445_060 Hb_000227_270 Hb_000227_270 Hb_017214_040--Hb_000227_270 Hb_000110_350 Hb_000110_350 Hb_017214_040--Hb_000110_350 Hb_102948_010--Hb_002218_020 Hb_001430_020 Hb_001430_020 Hb_102948_010--Hb_001430_020 Hb_005235_070 Hb_005235_070 Hb_102948_010--Hb_005235_070 Hb_102948_010--Hb_012438_030 Hb_000555_020 Hb_000555_020 Hb_102948_010--Hb_000555_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
17.4331 31.717 45.4455 33.6275 18.9855 14.2298
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
19.5245 9.43673 10.6996 15.9468 37.6542

CAGE analysis