Hb_000066_160

Information

Type -
Description -
Location Contig66: 250887-258079
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID GO:0004725
description phosphatidylinositol-3-phosphatase myotubularin-1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000066_160 0.0 - - -
2 Hb_000227_050 0.2351212837 - - -
3 Hb_080104_010 0.2646331331 - - unnamed protein product [Vitis vinifera]
4 Hb_133702_040 0.2659301377 - - -
5 Hb_003918_020 0.2838008828 - - -
6 Hb_011644_010 0.2931649679 - - PREDICTED: probable choline-phosphate cytidylyltransferase [Elaeis guineensis]
7 Hb_000661_070 0.2934595481 - - -
8 Hb_001449_030 0.3020901664 - - PREDICTED: RNA polymerase II-associated protein 3 isoform X3 [Jatropha curcas]
9 Hb_002200_050 0.3051957862 - - unknown [Lotus japonicus]
10 Hb_001159_150 0.3101371156 - - PREDICTED: ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic isoform X2 [Jatropha curcas]
11 Hb_005048_040 0.3158358753 - - PREDICTED: endonuclease 1 [Jatropha curcas]
12 Hb_006153_030 0.3185432621 - - PREDICTED: probable transaldolase [Jatropha curcas]
13 Hb_004235_030 0.3190567825 - - alpha-2,8-sialyltransferase 8b, putative [Ricinus communis]
14 Hb_029142_070 0.3212787722 - - -
15 Hb_004709_020 0.3236599063 - - PREDICTED: putative threonine aspartase [Jatropha curcas]
16 Hb_020035_010 0.325933191 - - PREDICTED: DNA-directed RNA polymerase V subunit 1-like isoform X2 [Glycine max]
17 Hb_002168_010 0.3298542768 - - PREDICTED: bifunctional dihydrofolate reductase-thymidylate synthase-like isoform X4 [Vitis vinifera]
18 Hb_000641_020 0.3303881488 - - PREDICTED: tubulin-folding cofactor B-like [Jatropha curcas]
19 Hb_125431_010 0.3311361498 - - -
20 Hb_000028_210 0.331821176 - - hypothetical protein CISIN_1g0103302mg, partial [Citrus sinensis]

Gene co-expression network

sample Hb_000066_160 Hb_000066_160 Hb_000227_050 Hb_000227_050 Hb_000066_160--Hb_000227_050 Hb_080104_010 Hb_080104_010 Hb_000066_160--Hb_080104_010 Hb_133702_040 Hb_133702_040 Hb_000066_160--Hb_133702_040 Hb_003918_020 Hb_003918_020 Hb_000066_160--Hb_003918_020 Hb_011644_010 Hb_011644_010 Hb_000066_160--Hb_011644_010 Hb_000661_070 Hb_000661_070 Hb_000066_160--Hb_000661_070 Hb_033222_010 Hb_033222_010 Hb_000227_050--Hb_033222_010 Hb_002636_150 Hb_002636_150 Hb_000227_050--Hb_002636_150 Hb_002200_050 Hb_002200_050 Hb_000227_050--Hb_002200_050 Hb_000160_160 Hb_000160_160 Hb_000227_050--Hb_000160_160 Hb_000028_210 Hb_000028_210 Hb_000227_050--Hb_000028_210 Hb_002168_010 Hb_002168_010 Hb_080104_010--Hb_002168_010 Hb_029142_070 Hb_029142_070 Hb_080104_010--Hb_029142_070 Hb_010984_040 Hb_010984_040 Hb_080104_010--Hb_010984_040 Hb_025288_010 Hb_025288_010 Hb_080104_010--Hb_025288_010 Hb_000125_020 Hb_000125_020 Hb_080104_010--Hb_000125_020 Hb_007943_200 Hb_007943_200 Hb_080104_010--Hb_007943_200 Hb_065866_010 Hb_065866_010 Hb_133702_040--Hb_065866_010 Hb_001159_150 Hb_001159_150 Hb_133702_040--Hb_001159_150 Hb_133702_040--Hb_011644_010 Hb_003747_060 Hb_003747_060 Hb_133702_040--Hb_003747_060 Hb_000097_010 Hb_000097_010 Hb_133702_040--Hb_000097_010 Hb_000656_340 Hb_000656_340 Hb_133702_040--Hb_000656_340 Hb_006629_010 Hb_006629_010 Hb_003918_020--Hb_006629_010 Hb_001741_120 Hb_001741_120 Hb_003918_020--Hb_001741_120 Hb_003918_020--Hb_001159_150 Hb_002477_050 Hb_002477_050 Hb_003918_020--Hb_002477_050 Hb_000365_050 Hb_000365_050 Hb_003918_020--Hb_000365_050 Hb_011794_080 Hb_011794_080 Hb_003918_020--Hb_011794_080 Hb_011644_010--Hb_000097_010 Hb_135940_010 Hb_135940_010 Hb_011644_010--Hb_135940_010 Hb_001017_060 Hb_001017_060 Hb_011644_010--Hb_001017_060 Hb_011644_010--Hb_029142_070 Hb_011644_010--Hb_000656_340 Hb_014834_040 Hb_014834_040 Hb_011644_010--Hb_014834_040 Hb_000258_140 Hb_000258_140 Hb_000661_070--Hb_000258_140 Hb_001221_340 Hb_001221_340 Hb_000661_070--Hb_001221_340 Hb_007973_010 Hb_007973_010 Hb_000661_070--Hb_007973_010 Hb_001452_210 Hb_001452_210 Hb_000661_070--Hb_001452_210 Hb_005048_040 Hb_005048_040 Hb_000661_070--Hb_005048_040 Hb_004897_010 Hb_004897_010 Hb_000661_070--Hb_004897_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0.170172 0.0319077 0.135764
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.292768 0.0575457 0 0.0933753 0.114785

CAGE analysis