Hb_000365_050

Information

Type -
Description -
Location Contig365: 28541-29606
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000365_050 0.0 - - -
2 Hb_011794_080 0.0893444932 - - acyl-CoA thioesterase, putative [Ricinus communis]
3 Hb_004668_090 0.1166620933 - - PREDICTED: uncharacterized protein LOC105630440 [Jatropha curcas]
4 Hb_132880_040 0.1178991658 - - PREDICTED: protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1-like isoform X2 [Jatropha curcas]
5 Hb_002675_140 0.1195797322 - - PREDICTED: E3 ubiquitin-protein ligase At1g63170 [Jatropha curcas]
6 Hb_000115_150 0.1237590439 - - PREDICTED: IST1 homolog [Jatropha curcas]
7 Hb_001157_200 0.1256739604 - - PREDICTED: uncharacterized protein LOC105645131 [Jatropha curcas]
8 Hb_002811_030 0.1319127279 - - PREDICTED: cysteine synthase [Jatropha curcas]
9 Hb_003055_040 0.1331571332 - - PREDICTED: secretory carrier-associated membrane protein 3-like isoform X1 [Jatropha curcas]
10 Hb_179306_020 0.1332819929 - - PREDICTED: uncharacterized protein LOC105634392 isoform X1 [Jatropha curcas]
11 Hb_009787_030 0.1361354931 - - Prolactin regulatory element-binding protein, putative [Ricinus communis]
12 Hb_000721_040 0.1364453736 - - PREDICTED: uncharacterized protein LOC105636110 isoform X1 [Jatropha curcas]
13 Hb_002686_310 0.1365394621 - - PREDICTED: aquaporin SIP1-1 [Jatropha curcas]
14 Hb_001571_050 0.1368001991 - - PREDICTED: endoplasmic reticulum-Golgi intermediate compartment protein 3-like [Populus euphratica]
15 Hb_033501_010 0.1374494837 - - hypothetical protein JCGZ_21381 [Jatropha curcas]
16 Hb_001014_210 0.1393841024 - - CYP51 [Hevea brasiliensis]
17 Hb_010174_150 0.1402151181 - - ubiquitin-protein ligase, putative [Ricinus communis]
18 Hb_000159_120 0.1403777033 - - PREDICTED: uncharacterized protein LOC105632857 [Jatropha curcas]
19 Hb_011674_020 0.1407652206 - - PREDICTED: NEDD8-activating enzyme E1 regulatory subunit-like [Jatropha curcas]
20 Hb_003253_050 0.1409186562 - - PREDICTED: IAA-amino acid hydrolase ILR1-like 3 [Jatropha curcas]

Gene co-expression network

sample Hb_000365_050 Hb_000365_050 Hb_011794_080 Hb_011794_080 Hb_000365_050--Hb_011794_080 Hb_004668_090 Hb_004668_090 Hb_000365_050--Hb_004668_090 Hb_132880_040 Hb_132880_040 Hb_000365_050--Hb_132880_040 Hb_002675_140 Hb_002675_140 Hb_000365_050--Hb_002675_140 Hb_000115_150 Hb_000115_150 Hb_000365_050--Hb_000115_150 Hb_001157_200 Hb_001157_200 Hb_000365_050--Hb_001157_200 Hb_025194_100 Hb_025194_100 Hb_011794_080--Hb_025194_100 Hb_001571_050 Hb_001571_050 Hb_011794_080--Hb_001571_050 Hb_000994_120 Hb_000994_120 Hb_011794_080--Hb_000994_120 Hb_000392_190 Hb_000392_190 Hb_011794_080--Hb_000392_190 Hb_009787_030 Hb_009787_030 Hb_011794_080--Hb_009787_030 Hb_002968_080 Hb_002968_080 Hb_004668_090--Hb_002968_080 Hb_179306_020 Hb_179306_020 Hb_004668_090--Hb_179306_020 Hb_005663_110 Hb_005663_110 Hb_004668_090--Hb_005663_110 Hb_000062_270 Hb_000062_270 Hb_004668_090--Hb_000062_270 Hb_001662_100 Hb_001662_100 Hb_004668_090--Hb_001662_100 Hb_000111_320 Hb_000111_320 Hb_004668_090--Hb_000111_320 Hb_132880_040--Hb_001157_200 Hb_000035_390 Hb_000035_390 Hb_132880_040--Hb_000035_390 Hb_004677_050 Hb_004677_050 Hb_132880_040--Hb_004677_050 Hb_000046_170 Hb_000046_170 Hb_132880_040--Hb_000046_170 Hb_000984_170 Hb_000984_170 Hb_132880_040--Hb_000984_170 Hb_006452_120 Hb_006452_120 Hb_132880_040--Hb_006452_120 Hb_000034_070 Hb_000034_070 Hb_002675_140--Hb_000034_070 Hb_001085_240 Hb_001085_240 Hb_002675_140--Hb_001085_240 Hb_001369_250 Hb_001369_250 Hb_002675_140--Hb_001369_250 Hb_003633_050 Hb_003633_050 Hb_002675_140--Hb_003633_050 Hb_001104_100 Hb_001104_100 Hb_002675_140--Hb_001104_100 Hb_000181_050 Hb_000181_050 Hb_002675_140--Hb_000181_050 Hb_000120_370 Hb_000120_370 Hb_000115_150--Hb_000120_370 Hb_003988_050 Hb_003988_050 Hb_000115_150--Hb_003988_050 Hb_062537_010 Hb_062537_010 Hb_000115_150--Hb_062537_010 Hb_000115_150--Hb_001104_100 Hb_005648_010 Hb_005648_010 Hb_000115_150--Hb_005648_010 Hb_000025_190 Hb_000025_190 Hb_000115_150--Hb_000025_190 Hb_003544_030 Hb_003544_030 Hb_001157_200--Hb_003544_030 Hb_007747_080 Hb_007747_080 Hb_001157_200--Hb_007747_080 Hb_001157_200--Hb_000984_170 Hb_001157_200--Hb_006452_120 Hb_001157_200--Hb_005663_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.710845 1.3939 0.641539 3.18771 1.16523 1.65843
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.79281 1.25461 0.784412 2.85739 1.61484

CAGE analysis