Hb_000034_070

Information

Type -
Description -
Location Contig34: 170184-174678
Sequence    

Annotation

kegg
ID rcu:RCOM_1039390
description hypothetical protein
nr
ID XP_012067991.1
description PREDICTED: DNA (cytosine-5)-methyltransferase 3B-like [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067LBI1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15881 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_35478: 170123-174698
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000034_070 0.0 - - PREDICTED: DNA (cytosine-5)-methyltransferase 3B-like [Jatropha curcas]
2 Hb_002675_140 0.0828151105 - - PREDICTED: E3 ubiquitin-protein ligase At1g63170 [Jatropha curcas]
3 Hb_000331_180 0.0850596479 transcription factor TF Family: mTERF PREDICTED: uncharacterized protein LOC105640220 [Jatropha curcas]
4 Hb_001348_020 0.0902115855 - - PREDICTED: uncharacterized protein LOC105638926 isoform X2 [Jatropha curcas]
5 Hb_001366_370 0.0934618845 - - PREDICTED: aarF domain-containing protein kinase 4 isoform X1 [Jatropha curcas]
6 Hb_073973_100 0.0935927502 - - PREDICTED: uncharacterized protein LOC105638910 [Jatropha curcas]
7 Hb_000181_050 0.0940771318 - - PREDICTED: uncharacterized protein LOC105637463 [Jatropha curcas]
8 Hb_001085_240 0.100877965 - - PREDICTED: probable calcium-binding protein CML22 isoform X1 [Jatropha curcas]
9 Hb_000665_050 0.1032475877 - - PREDICTED: aberrant root formation protein 4 [Jatropha curcas]
10 Hb_003813_050 0.1039985638 - - PREDICTED: tRNA-specific adenosine deaminase 2-like isoform X1 [Jatropha curcas]
11 Hb_002889_030 0.1044972861 - - PREDICTED: uncharacterized protein At3g49140 [Jatropha curcas]
12 Hb_000783_010 0.1060286264 - - PREDICTED: ras-related protein RABF1 [Jatropha curcas]
13 Hb_000381_120 0.1092193102 - - PREDICTED: uncharacterized protein LOC105648175 [Jatropha curcas]
14 Hb_031862_100 0.1098021063 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
15 Hb_001369_250 0.1100794004 - - PREDICTED: uncharacterized protein LOC105646469 isoform X1 [Jatropha curcas]
16 Hb_000392_190 0.1105055696 - - PREDICTED: NAP1-related protein 2 [Jatropha curcas]
17 Hb_165928_030 0.1124309184 - - conserved hypothetical protein [Ricinus communis]
18 Hb_002000_080 0.1136985961 - - PREDICTED: polypyrimidine tract-binding protein homolog 3 isoform X2 [Jatropha curcas]
19 Hb_004734_040 0.1138719335 - - eukaryotic translation initiation factor 5A isoform I [Hevea brasiliensis]
20 Hb_009787_030 0.1142480657 - - Prolactin regulatory element-binding protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_000034_070 Hb_000034_070 Hb_002675_140 Hb_002675_140 Hb_000034_070--Hb_002675_140 Hb_000331_180 Hb_000331_180 Hb_000034_070--Hb_000331_180 Hb_001348_020 Hb_001348_020 Hb_000034_070--Hb_001348_020 Hb_001366_370 Hb_001366_370 Hb_000034_070--Hb_001366_370 Hb_073973_100 Hb_073973_100 Hb_000034_070--Hb_073973_100 Hb_000181_050 Hb_000181_050 Hb_000034_070--Hb_000181_050 Hb_001085_240 Hb_001085_240 Hb_002675_140--Hb_001085_240 Hb_001369_250 Hb_001369_250 Hb_002675_140--Hb_001369_250 Hb_003633_050 Hb_003633_050 Hb_002675_140--Hb_003633_050 Hb_001104_100 Hb_001104_100 Hb_002675_140--Hb_001104_100 Hb_002675_140--Hb_000181_050 Hb_000783_010 Hb_000783_010 Hb_000331_180--Hb_000783_010 Hb_032808_010 Hb_032808_010 Hb_000331_180--Hb_032808_010 Hb_000331_180--Hb_001366_370 Hb_000510_300 Hb_000510_300 Hb_000331_180--Hb_000510_300 Hb_002445_060 Hb_002445_060 Hb_000331_180--Hb_002445_060 Hb_062537_010 Hb_062537_010 Hb_001348_020--Hb_062537_010 Hb_000228_110 Hb_000228_110 Hb_001348_020--Hb_000228_110 Hb_011628_060 Hb_011628_060 Hb_001348_020--Hb_011628_060 Hb_000111_320 Hb_000111_320 Hb_001348_020--Hb_000111_320 Hb_000392_430 Hb_000392_430 Hb_001348_020--Hb_000392_430 Hb_023001_040 Hb_023001_040 Hb_001348_020--Hb_023001_040 Hb_000200_020 Hb_000200_020 Hb_001366_370--Hb_000200_020 Hb_002053_140 Hb_002053_140 Hb_001366_370--Hb_002053_140 Hb_001366_370--Hb_000783_010 Hb_001427_160 Hb_001427_160 Hb_001366_370--Hb_001427_160 Hb_009787_030 Hb_009787_030 Hb_001366_370--Hb_009787_030 Hb_001366_370--Hb_000510_300 Hb_003376_330 Hb_003376_330 Hb_073973_100--Hb_003376_330 Hb_000270_490 Hb_000270_490 Hb_073973_100--Hb_000270_490 Hb_000556_120 Hb_000556_120 Hb_073973_100--Hb_000556_120 Hb_002000_080 Hb_002000_080 Hb_073973_100--Hb_002000_080 Hb_023732_030 Hb_023732_030 Hb_073973_100--Hb_023732_030 Hb_165928_030 Hb_165928_030 Hb_073973_100--Hb_165928_030 Hb_002889_030 Hb_002889_030 Hb_000181_050--Hb_002889_030 Hb_003813_050 Hb_003813_050 Hb_000181_050--Hb_003813_050 Hb_000181_050--Hb_001085_240 Hb_000096_160 Hb_000096_160 Hb_000181_050--Hb_000096_160
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
3.59408 1.60987 3.44237 6.01576 2.10892 4.23875
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
6.03238 4.78462 3.25476 7.60075 2.46635

CAGE analysis