Hb_007973_010

Information

Type -
Description -
Location Contig7973: 17636-20519
Sequence    

Annotation

kegg
ID rcu:RCOM_0653390
description hypothetical protein
nr
ID XP_012068895.1
description PREDICTED: uncharacterized protein LOC105631404 isoform X2 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KX71
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24711 PE=4 SV=1
Gene Ontology
ID GO:0005488
description PREDICTED: uncharacterized protein LOC105631404 isoform X2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_58585: 17904-18068
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007973_010 0.0 - - PREDICTED: uncharacterized protein LOC105631404 isoform X2 [Jatropha curcas]
2 Hb_001221_340 0.141022138 - - hypothetical protein EUGRSUZ_B00102 [Eucalyptus grandis]
3 Hb_052764_110 0.1455004332 - - PREDICTED: quinone oxidoreductase PIG3 isoform X1 [Jatropha curcas]
4 Hb_004317_060 0.1491092561 - - PREDICTED: testis-expressed sequence 10 protein isoform X2 [Jatropha curcas]
5 Hb_008447_040 0.1585482172 transcription factor TF Family: HB homeobox protein knotted-1, putative [Ricinus communis]
6 Hb_004785_080 0.1610058605 - - hypothetical protein POPTR_0005s21250g [Populus trichocarpa]
7 Hb_000270_390 0.1623302044 - - PREDICTED: uncharacterized protein DDB_G0271670 [Jatropha curcas]
8 Hb_001726_090 0.1631643053 - - -
9 Hb_000258_140 0.163907193 - - conserved hypothetical protein [Ricinus communis]
10 Hb_003106_190 0.1652741793 - - Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA, putative [Ricinus communis]
11 Hb_125431_010 0.1667982193 - - -
12 Hb_001999_210 0.1677921724 - - PREDICTED: sodium-dependent phosphate transport protein 1, chloroplastic [Eucalyptus grandis]
13 Hb_000613_070 0.1693185959 - - -
14 Hb_003606_060 0.1704650343 - - PREDICTED: uncharacterized protein LOC105649867 [Jatropha curcas]
15 Hb_001452_210 0.17356694 - - molybdopterin biosynthesis CNX1 protein [Arabidopsis thaliana]
16 Hb_001595_080 0.1772942429 - - conserved hypothetical protein [Ricinus communis]
17 Hb_002414_060 0.1789095016 - - hypothetical protein EUGRSUZ_E01310 [Eucalyptus grandis]
18 Hb_000256_200 0.1802657716 - - conserved hypothetical protein [Ricinus communis]
19 Hb_002481_060 0.1809047315 - - PREDICTED: uncharacterized protein LOC105640851 [Jatropha curcas]
20 Hb_000525_090 0.1809823466 - - Auxin-induced protein 5NG4, putative [Ricinus communis]

Gene co-expression network

sample Hb_007973_010 Hb_007973_010 Hb_001221_340 Hb_001221_340 Hb_007973_010--Hb_001221_340 Hb_052764_110 Hb_052764_110 Hb_007973_010--Hb_052764_110 Hb_004317_060 Hb_004317_060 Hb_007973_010--Hb_004317_060 Hb_008447_040 Hb_008447_040 Hb_007973_010--Hb_008447_040 Hb_004785_080 Hb_004785_080 Hb_007973_010--Hb_004785_080 Hb_000270_390 Hb_000270_390 Hb_007973_010--Hb_000270_390 Hb_001452_210 Hb_001452_210 Hb_001221_340--Hb_001452_210 Hb_002131_030 Hb_002131_030 Hb_001221_340--Hb_002131_030 Hb_002908_060 Hb_002908_060 Hb_001221_340--Hb_002908_060 Hb_000053_060 Hb_000053_060 Hb_001221_340--Hb_000053_060 Hb_001953_080 Hb_001953_080 Hb_001221_340--Hb_001953_080 Hb_052764_110--Hb_001452_210 Hb_007023_030 Hb_007023_030 Hb_052764_110--Hb_007023_030 Hb_052764_110--Hb_004785_080 Hb_002338_050 Hb_002338_050 Hb_052764_110--Hb_002338_050 Hb_052764_110--Hb_000053_060 Hb_098315_080 Hb_098315_080 Hb_052764_110--Hb_098315_080 Hb_002414_060 Hb_002414_060 Hb_004317_060--Hb_002414_060 Hb_004317_060--Hb_000270_390 Hb_001437_190 Hb_001437_190 Hb_004317_060--Hb_001437_190 Hb_084670_010 Hb_084670_010 Hb_004317_060--Hb_084670_010 Hb_007558_100 Hb_007558_100 Hb_004317_060--Hb_007558_100 Hb_000237_040 Hb_000237_040 Hb_004317_060--Hb_000237_040 Hb_127552_060 Hb_127552_060 Hb_008447_040--Hb_127552_060 Hb_004448_090 Hb_004448_090 Hb_008447_040--Hb_004448_090 Hb_008447_040--Hb_007023_030 Hb_000429_150 Hb_000429_150 Hb_008447_040--Hb_000429_150 Hb_000236_310 Hb_000236_310 Hb_008447_040--Hb_000236_310 Hb_008447_040--Hb_002414_060 Hb_000204_070 Hb_000204_070 Hb_004785_080--Hb_000204_070 Hb_000197_220 Hb_000197_220 Hb_004785_080--Hb_000197_220 Hb_158560_010 Hb_158560_010 Hb_004785_080--Hb_158560_010 Hb_001999_210 Hb_001999_210 Hb_004785_080--Hb_001999_210 Hb_000789_200 Hb_000789_200 Hb_004785_080--Hb_000789_200 Hb_000803_320 Hb_000803_320 Hb_000270_390--Hb_000803_320 Hb_002768_060 Hb_002768_060 Hb_000270_390--Hb_002768_060 Hb_003544_160 Hb_003544_160 Hb_000270_390--Hb_003544_160 Hb_002874_110 Hb_002874_110 Hb_000270_390--Hb_002874_110 Hb_000270_390--Hb_000789_200
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.235961 0.879957 0.387081 1.64088 0.464776 1.96498
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.48141 1.16449 0.364384 1.78806 3.22933

CAGE analysis