Hb_001452_210

Information

Type -
Description -
Location Contig1452: 320914-325023
Sequence    

Annotation

kegg
ID cam:101509403
description molybdopterin biosynthesis protein CNX1-like
nr
ID BAF00362.1
description molybdopterin biosynthesis CNX1 protein [Arabidopsis thaliana]
swissprot
ID Q9ZL45
description Molybdopterin adenylyltransferase OS=Helicobacter pylori (strain J99 / ATCC 700824) GN=mog PE=1 SV=1
trembl
ID Q0WR87
description Molybdopterin biosynthesis CNX1 protein OS=Arabidopsis thaliana GN=At5g20990 PE=2 SV=1
Gene Ontology
ID GO:0005829
description molybdopterin biosynthesis protein cnx1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_11727: 324168-345374 , PASA_asmbl_11728: 320814-341806
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001452_210 0.0 - - molybdopterin biosynthesis CNX1 protein [Arabidopsis thaliana]
2 Hb_052764_110 0.1110030593 - - PREDICTED: quinone oxidoreductase PIG3 isoform X1 [Jatropha curcas]
3 Hb_098315_080 0.1136601959 - - methylmalonate-semialdehyde dehydrogenase, putative [Ricinus communis]
4 Hb_000227_070 0.1205291871 - - PREDICTED: ATP-dependent (S)-NAD(P)H-hydrate dehydratase isoform X2 [Jatropha curcas]
5 Hb_179924_010 0.1288181819 - - PREDICTED: pentatricopeptide repeat-containing protein At1g62930, chloroplastic-like [Populus euphratica]
6 Hb_003098_080 0.1345900203 - - -
7 Hb_001221_340 0.1391204132 - - hypothetical protein EUGRSUZ_B00102 [Eucalyptus grandis]
8 Hb_000053_060 0.1401026975 - - hypothetical protein VITISV_022618 [Vitis vinifera]
9 Hb_007023_030 0.1411798991 - - PREDICTED: pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like [Jatropha curcas]
10 Hb_000286_200 0.1433208333 desease resistance Gene Name: TIR PREDICTED: TMV resistance protein N-like isoform X2 [Jatropha curcas]
11 Hb_000510_240 0.1456552029 desease resistance Gene Name: PRK ATP binding protein, putative [Ricinus communis]
12 Hb_007383_020 0.1491638081 - - conserved hypothetical protein [Ricinus communis]
13 Hb_001318_050 0.1555430322 - - Serine/threonine-protein kinase PBS1, putative [Ricinus communis]
14 Hb_002811_030 0.156796398 - - PREDICTED: cysteine synthase [Jatropha curcas]
15 Hb_008447_040 0.1583890324 transcription factor TF Family: HB homeobox protein knotted-1, putative [Ricinus communis]
16 Hb_142343_010 0.1612826256 - - ATP binding protein, putative [Ricinus communis]
17 Hb_001157_110 0.1634734544 - - PREDICTED: formate--tetrahydrofolate ligase [Populus euphratica]
18 Hb_019053_030 0.1636062124 - - PREDICTED: sulfite oxidase [Jatropha curcas]
19 Hb_000599_100 0.1652371956 - - hypothetical protein B456_001G254000 [Gossypium raimondii]
20 Hb_000721_040 0.1660924017 - - PREDICTED: uncharacterized protein LOC105636110 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_001452_210 Hb_001452_210 Hb_052764_110 Hb_052764_110 Hb_001452_210--Hb_052764_110 Hb_098315_080 Hb_098315_080 Hb_001452_210--Hb_098315_080 Hb_000227_070 Hb_000227_070 Hb_001452_210--Hb_000227_070 Hb_179924_010 Hb_179924_010 Hb_001452_210--Hb_179924_010 Hb_003098_080 Hb_003098_080 Hb_001452_210--Hb_003098_080 Hb_001221_340 Hb_001221_340 Hb_001452_210--Hb_001221_340 Hb_007023_030 Hb_007023_030 Hb_052764_110--Hb_007023_030 Hb_004785_080 Hb_004785_080 Hb_052764_110--Hb_004785_080 Hb_002338_050 Hb_002338_050 Hb_052764_110--Hb_002338_050 Hb_000053_060 Hb_000053_060 Hb_052764_110--Hb_000053_060 Hb_052764_110--Hb_098315_080 Hb_098315_080--Hb_007023_030 Hb_098315_080--Hb_000053_060 Hb_004411_060 Hb_004411_060 Hb_098315_080--Hb_004411_060 Hb_004449_080 Hb_004449_080 Hb_098315_080--Hb_004449_080 Hb_006909_010 Hb_006909_010 Hb_098315_080--Hb_006909_010 Hb_000510_240 Hb_000510_240 Hb_000227_070--Hb_000510_240 Hb_016522_010 Hb_016522_010 Hb_000227_070--Hb_016522_010 Hb_010174_150 Hb_010174_150 Hb_000227_070--Hb_010174_150 Hb_001085_240 Hb_001085_240 Hb_000227_070--Hb_001085_240 Hb_000096_160 Hb_000096_160 Hb_000227_070--Hb_000096_160 Hb_000227_070--Hb_179924_010 Hb_000159_120 Hb_000159_120 Hb_179924_010--Hb_000159_120 Hb_001731_030 Hb_001731_030 Hb_179924_010--Hb_001731_030 Hb_012022_080 Hb_012022_080 Hb_179924_010--Hb_012022_080 Hb_004586_350 Hb_004586_350 Hb_179924_010--Hb_004586_350 Hb_019053_030 Hb_019053_030 Hb_179924_010--Hb_019053_030 Hb_002908_060 Hb_002908_060 Hb_003098_080--Hb_002908_060 Hb_001673_100 Hb_001673_100 Hb_003098_080--Hb_001673_100 Hb_001318_050 Hb_001318_050 Hb_003098_080--Hb_001318_050 Hb_002539_020 Hb_002539_020 Hb_003098_080--Hb_002539_020 Hb_007383_020 Hb_007383_020 Hb_003098_080--Hb_007383_020 Hb_007973_010 Hb_007973_010 Hb_001221_340--Hb_007973_010 Hb_002131_030 Hb_002131_030 Hb_001221_340--Hb_002131_030 Hb_001221_340--Hb_002908_060 Hb_001221_340--Hb_000053_060 Hb_001953_080 Hb_001953_080 Hb_001221_340--Hb_001953_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.75304 2.96875 1.49213 8.66877 2.37392 8.87719
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
9.28929 6.00553 4.61114 19.301 12.4745

CAGE analysis