Hb_000049_200

Information

Type -
Description -
Location Contig49: 154713-172017
Sequence    

Annotation

kegg
ID pop:POPTR_0002s25670g
description hypothetical protein
nr
ID XP_012085208.1
description PREDICTED: uncharacterized protein LOC105644462 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JR66
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17609 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000049_200 0.0 - - PREDICTED: uncharacterized protein LOC105644462 [Jatropha curcas]
2 Hb_002627_020 0.1595104142 - - PREDICTED: TBC1 domain family member 2B [Jatropha curcas]
3 Hb_000300_100 0.170460451 - - NADH-cytochrome b5 reductase 1 [Morus notabilis]
4 Hb_000392_250 0.1707424895 - - PREDICTED: HVA22-like protein a [Jatropha curcas]
5 Hb_002960_090 0.1715629979 - - protein with unknown function [Ricinus communis]
6 Hb_002016_140 0.1804627398 - - PREDICTED: probable E3 ubiquitin-protein ligase BAH1-like 1 [Jatropha curcas]
7 Hb_001300_170 0.1849110284 - - conserved hypothetical protein [Ricinus communis]
8 Hb_010534_020 0.1865454733 - - PREDICTED: protein XRI1 isoform X1 [Jatropha curcas]
9 Hb_000009_420 0.1965164152 - - PREDICTED: uncharacterized protein LOC105639614 isoform X2 [Jatropha curcas]
10 Hb_003398_040 0.1975954527 - - PREDICTED: actin-related protein 5 isoform X1 [Jatropha curcas]
11 Hb_000216_050 0.2057945589 - - PREDICTED: indole-3-acetaldehyde oxidase-like [Jatropha curcas]
12 Hb_172706_020 0.2090920735 - - PREDICTED: protein ABIL2 [Jatropha curcas]
13 Hb_004449_040 0.2094099273 - - PREDICTED: uncharacterized protein C630.12 [Jatropha curcas]
14 Hb_002701_160 0.2132720908 - - PREDICTED: UDP-arabinopyranose mutase 1 [Jatropha curcas]
15 Hb_000310_120 0.2137042066 - - PREDICTED: probable transaldolase [Jatropha curcas]
16 Hb_000416_190 0.2142468063 - - -
17 Hb_003299_020 0.214724596 - - PREDICTED: uncharacterized protein LOC105649783 [Jatropha curcas]
18 Hb_000206_230 0.2152831704 - - conserved hypothetical protein [Ricinus communis]
19 Hb_001754_050 0.2181645811 - - protein arginine n-methyltransferase, putative [Ricinus communis]
20 Hb_002397_050 0.2202158953 - - PREDICTED: ACT domain-containing protein ACR4 isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_000049_200 Hb_000049_200 Hb_002627_020 Hb_002627_020 Hb_000049_200--Hb_002627_020 Hb_000300_100 Hb_000300_100 Hb_000049_200--Hb_000300_100 Hb_000392_250 Hb_000392_250 Hb_000049_200--Hb_000392_250 Hb_002960_090 Hb_002960_090 Hb_000049_200--Hb_002960_090 Hb_002016_140 Hb_002016_140 Hb_000049_200--Hb_002016_140 Hb_001300_170 Hb_001300_170 Hb_000049_200--Hb_001300_170 Hb_002627_020--Hb_002960_090 Hb_000172_280 Hb_000172_280 Hb_002627_020--Hb_000172_280 Hb_000175_470 Hb_000175_470 Hb_002627_020--Hb_000175_470 Hb_027380_190 Hb_027380_190 Hb_002627_020--Hb_027380_190 Hb_000310_120 Hb_000310_120 Hb_002627_020--Hb_000310_120 Hb_000648_050 Hb_000648_050 Hb_002627_020--Hb_000648_050 Hb_010534_020 Hb_010534_020 Hb_000300_100--Hb_010534_020 Hb_003398_040 Hb_003398_040 Hb_000300_100--Hb_003398_040 Hb_010381_040 Hb_010381_040 Hb_000300_100--Hb_010381_040 Hb_000310_060 Hb_000310_060 Hb_000300_100--Hb_000310_060 Hb_000300_100--Hb_000310_120 Hb_001587_040 Hb_001587_040 Hb_000300_100--Hb_001587_040 Hb_001754_050 Hb_001754_050 Hb_000392_250--Hb_001754_050 Hb_000392_250--Hb_010534_020 Hb_172706_020 Hb_172706_020 Hb_000392_250--Hb_172706_020 Hb_000622_330 Hb_000622_330 Hb_000392_250--Hb_000622_330 Hb_012053_020 Hb_012053_020 Hb_000392_250--Hb_012053_020 Hb_004218_130 Hb_004218_130 Hb_000392_250--Hb_004218_130 Hb_015778_040 Hb_015778_040 Hb_002960_090--Hb_015778_040 Hb_101146_010 Hb_101146_010 Hb_002960_090--Hb_101146_010 Hb_000984_260 Hb_000984_260 Hb_002960_090--Hb_000984_260 Hb_006210_020 Hb_006210_020 Hb_002960_090--Hb_006210_020 Hb_005701_110 Hb_005701_110 Hb_002960_090--Hb_005701_110 Hb_002391_320 Hb_002391_320 Hb_002016_140--Hb_002391_320 Hb_001329_070 Hb_001329_070 Hb_002016_140--Hb_001329_070 Hb_000589_170 Hb_000589_170 Hb_002016_140--Hb_000589_170 Hb_012851_020 Hb_012851_020 Hb_002016_140--Hb_012851_020 Hb_000753_110 Hb_000753_110 Hb_002016_140--Hb_000753_110 Hb_000206_230 Hb_000206_230 Hb_002016_140--Hb_000206_230 Hb_000005_340 Hb_000005_340 Hb_001300_170--Hb_000005_340 Hb_000594_070 Hb_000594_070 Hb_001300_170--Hb_000594_070 Hb_002701_160 Hb_002701_160 Hb_001300_170--Hb_002701_160 Hb_001300_170--Hb_000984_260 Hb_000092_120 Hb_000092_120 Hb_001300_170--Hb_000092_120 Hb_001300_170--Hb_002960_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.237843 1.01635 0.706885 0.00802232 0.049587
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.254656 0.329202 0 0.602602 0.425677

CAGE analysis