Hb_171537_010

Information

Type -
Description -
Location Contig171537: 389-5451
Sequence    

Annotation

kegg
ID rcu:RCOM_0817130
description serine/threonine-protein kinase bri1, putative (EC:1.3.1.74)
nr
ID XP_002518311.1
description serine/threonine-protein kinase bri1, putative [Ricinus communis]
swissprot
ID Q940E8
description Leucine-rich repeat receptor-like protein FASCIATED EAR2 OS=Zea mays GN=FEA2 PE=1 SV=1
trembl
ID B9RX42
description Serine/threonine-protein kinase bri1, putative OS=Ricinus communis GN=RCOM_0817130 PE=4 SV=1
Gene Ontology
ID GO:0003824
description serine threonine-protein kinase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_171537_010 0.0 - - serine/threonine-protein kinase bri1, putative [Ricinus communis]
2 Hb_002383_030 0.2355770518 - - hypothetical protein JCGZ_09913 [Jatropha curcas]
3 Hb_002876_160 0.2551726071 - - sucrose transporter 1 [Hevea brasiliensis]
4 Hb_074108_010 0.2758260928 - - eukaryotic translation initiation factor 2c, putative [Ricinus communis]
5 Hb_000210_090 0.2909929655 - - PREDICTED: cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG7 [Jatropha curcas]
6 Hb_002760_040 0.2917305114 - - PREDICTED: uncharacterized protein LOC105641234 [Jatropha curcas]
7 Hb_002700_080 0.2919533306 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_24521 [Jatropha curcas]
8 Hb_007403_080 0.2988227356 - - conserved hypothetical protein [Ricinus communis]
9 Hb_000483_040 0.3145173001 - - Cell division protein ftsH, putative [Ricinus communis]
10 Hb_002026_060 0.3148918393 - - PREDICTED: uncharacterized protein LOC105645786 [Jatropha curcas]
11 Hb_026198_030 0.3158292501 - - PREDICTED: ABC transporter G family member 25 [Jatropha curcas]
12 Hb_005656_140 0.3159266447 transcription factor TF Family: bZIP PREDICTED: basic leucine zipper 9 [Jatropha curcas]
13 Hb_151671_010 0.3176080221 - - hypothetical protein POPTR_0005s04441g [Populus trichocarpa]
14 Hb_001976_080 0.3182725464 transcription factor TF Family: AP2 PREDICTED: AP2-like ethylene-responsive transcription factor AIL6 [Jatropha curcas]
15 Hb_117895_010 0.3194164928 - - hypothetical protein JCGZ_17178 [Jatropha curcas]
16 Hb_004648_070 0.3201595994 - - ubiquitin-protein ligase, putative [Ricinus communis]
17 Hb_006970_070 0.3225622383 - - conserved hypothetical protein [Ricinus communis]
18 Hb_005699_080 0.3302871174 - - PREDICTED: ABC transporter G family member 10-like [Jatropha curcas]
19 Hb_000000_100 0.3321734985 - - hypothetical protein POPTR_0002s13260g [Populus trichocarpa]
20 Hb_000665_020 0.3339545689 - - -

Gene co-expression network

sample Hb_171537_010 Hb_171537_010 Hb_002383_030 Hb_002383_030 Hb_171537_010--Hb_002383_030 Hb_002876_160 Hb_002876_160 Hb_171537_010--Hb_002876_160 Hb_074108_010 Hb_074108_010 Hb_171537_010--Hb_074108_010 Hb_000210_090 Hb_000210_090 Hb_171537_010--Hb_000210_090 Hb_002760_040 Hb_002760_040 Hb_171537_010--Hb_002760_040 Hb_002700_080 Hb_002700_080 Hb_171537_010--Hb_002700_080 Hb_002383_030--Hb_074108_010 Hb_023755_010 Hb_023755_010 Hb_002383_030--Hb_023755_010 Hb_066655_010 Hb_066655_010 Hb_002383_030--Hb_066655_010 Hb_000418_070 Hb_000418_070 Hb_002383_030--Hb_000418_070 Hb_002383_030--Hb_002876_160 Hb_002876_160--Hb_002700_080 Hb_002026_060 Hb_002026_060 Hb_002876_160--Hb_002026_060 Hb_005188_030 Hb_005188_030 Hb_002876_160--Hb_005188_030 Hb_023344_060 Hb_023344_060 Hb_002876_160--Hb_023344_060 Hb_000384_110 Hb_000384_110 Hb_002876_160--Hb_000384_110 Hb_000665_020 Hb_000665_020 Hb_002876_160--Hb_000665_020 Hb_011671_060 Hb_011671_060 Hb_074108_010--Hb_011671_060 Hb_000304_060 Hb_000304_060 Hb_074108_010--Hb_000304_060 Hb_000980_070 Hb_000980_070 Hb_074108_010--Hb_000980_070 Hb_001976_080 Hb_001976_080 Hb_074108_010--Hb_001976_080 Hb_000638_210 Hb_000638_210 Hb_000210_090--Hb_000638_210 Hb_007379_020 Hb_007379_020 Hb_000210_090--Hb_007379_020 Hb_003078_050 Hb_003078_050 Hb_000210_090--Hb_003078_050 Hb_032264_090 Hb_032264_090 Hb_000210_090--Hb_032264_090 Hb_000210_090--Hb_002026_060 Hb_005656_140 Hb_005656_140 Hb_000210_090--Hb_005656_140 Hb_009897_020 Hb_009897_020 Hb_002760_040--Hb_009897_020 Hb_002760_040--Hb_005656_140 Hb_003494_060 Hb_003494_060 Hb_002760_040--Hb_003494_060 Hb_002686_400 Hb_002686_400 Hb_002760_040--Hb_002686_400 Hb_117895_010 Hb_117895_010 Hb_002760_040--Hb_117895_010 Hb_003155_020 Hb_003155_020 Hb_002760_040--Hb_003155_020 Hb_001019_180 Hb_001019_180 Hb_002700_080--Hb_001019_180 Hb_011512_130 Hb_011512_130 Hb_002700_080--Hb_011512_130 Hb_008066_070 Hb_008066_070 Hb_002700_080--Hb_008066_070 Hb_178051_070 Hb_178051_070 Hb_002700_080--Hb_178051_070 Hb_002700_080--Hb_002026_060 Hb_011311_020 Hb_011311_020 Hb_002700_080--Hb_011311_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0601778 1.07476 0.0184989 0.266834 0.356378 0.095417
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0216901 0.736398 0.155623 0.045571

CAGE analysis