Hb_002026_060

Information

Type -
Description -
Location Contig2026: 50985-54080
Sequence    

Annotation

kegg
ID rcu:RCOM_1687100
description hypothetical protein
nr
ID XP_012086872.1
description PREDICTED: uncharacterized protein LOC105645786 [Jatropha curcas]
swissprot
ID Q9SRE5
description Uncharacterized protein At1g76660 OS=Arabidopsis thaliana GN=At1g76660 PE=2 SV=1
trembl
ID A0A067JZI1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20571 PE=4 SV=1
Gene Ontology
ID GO:0006950
description hydroxyproline-rich glycoprotein family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002026_060 0.0 - - PREDICTED: uncharacterized protein LOC105645786 [Jatropha curcas]
2 Hb_005496_180 0.1361804485 - - PREDICTED: U-box domain-containing protein 4-like [Jatropha curcas]
3 Hb_014068_050 0.1432945325 - - PREDICTED: probable serine/threonine-protein kinase RLCKVII [Jatropha curcas]
4 Hb_000634_070 0.144524843 - - PREDICTED: probable receptor-like protein kinase At5g47070 [Jatropha curcas]
5 Hb_000976_290 0.1451504471 transcription factor TF Family: MYB-related PREDICTED: uncharacterized protein LOC105646228 [Jatropha curcas]
6 Hb_000809_090 0.1515590416 - - PREDICTED: mitogen-activated protein kinase kinase kinase YODA isoform X1 [Jatropha curcas]
7 Hb_002097_200 0.1559063999 - - protein phosphatase 2a, regulatory subunit, putative [Ricinus communis]
8 Hb_000049_090 0.1576657902 - - PREDICTED: uncharacterized protein LOC105644472 isoform X1 [Jatropha curcas]
9 Hb_000318_480 0.1632821785 - - PREDICTED: RING-H2 finger protein ATL65 [Jatropha curcas]
10 Hb_002700_080 0.1667342625 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_24521 [Jatropha curcas]
11 Hb_010921_030 0.1688577968 transcription factor TF Family: PHD PREDICTED: PHD finger protein At2g01810 [Jatropha curcas]
12 Hb_000987_060 0.1702500873 - - PREDICTED: BRCA1-A complex subunit Abraxas [Jatropha curcas]
13 Hb_000953_050 0.1708952172 transcription factor TF Family: C2H2 PREDICTED: uncharacterized protein LOC105629451 [Jatropha curcas]
14 Hb_000483_040 0.1715143831 - - Cell division protein ftsH, putative [Ricinus communis]
15 Hb_052764_030 0.1720991743 transcription factor TF Family: B3 PREDICTED: B3 domain-containing protein Os07g0563300 [Jatropha curcas]
16 Hb_000062_080 0.1745608015 transcription factor TF Family: ARR-B PREDICTED: two-component response regulator ARR11-like [Jatropha curcas]
17 Hb_003055_140 0.1768494865 transcription factor TF Family: SNF2 PREDICTED: uncharacterized protein LOC105649495 [Jatropha curcas]
18 Hb_008066_070 0.1776736533 transcription factor TF Family: ERF AP2/ERF super family protein [Hevea brasiliensis]
19 Hb_002053_130 0.1780277862 - - UDP-glucose 4-epimerase, putative [Ricinus communis]
20 Hb_000179_240 0.1786453858 - - PREDICTED: threonine synthase 1, chloroplastic [Jatropha curcas]

Gene co-expression network

sample Hb_002026_060 Hb_002026_060 Hb_005496_180 Hb_005496_180 Hb_002026_060--Hb_005496_180 Hb_014068_050 Hb_014068_050 Hb_002026_060--Hb_014068_050 Hb_000634_070 Hb_000634_070 Hb_002026_060--Hb_000634_070 Hb_000976_290 Hb_000976_290 Hb_002026_060--Hb_000976_290 Hb_000809_090 Hb_000809_090 Hb_002026_060--Hb_000809_090 Hb_002097_200 Hb_002097_200 Hb_002026_060--Hb_002097_200 Hb_000953_050 Hb_000953_050 Hb_005496_180--Hb_000953_050 Hb_002572_050 Hb_002572_050 Hb_005496_180--Hb_002572_050 Hb_000805_230 Hb_000805_230 Hb_005496_180--Hb_000805_230 Hb_000120_160 Hb_000120_160 Hb_005496_180--Hb_000120_160 Hb_002053_130 Hb_002053_130 Hb_005496_180--Hb_002053_130 Hb_002915_070 Hb_002915_070 Hb_005496_180--Hb_002915_070 Hb_006538_080 Hb_006538_080 Hb_014068_050--Hb_006538_080 Hb_000111_180 Hb_000111_180 Hb_014068_050--Hb_000111_180 Hb_002301_170 Hb_002301_170 Hb_014068_050--Hb_002301_170 Hb_000512_010 Hb_000512_010 Hb_014068_050--Hb_000512_010 Hb_052764_030 Hb_052764_030 Hb_014068_050--Hb_052764_030 Hb_000205_240 Hb_000205_240 Hb_014068_050--Hb_000205_240 Hb_003078_050 Hb_003078_050 Hb_000634_070--Hb_003078_050 Hb_003097_100 Hb_003097_100 Hb_000634_070--Hb_003097_100 Hb_000069_230 Hb_000069_230 Hb_000634_070--Hb_000069_230 Hb_000634_070--Hb_000953_050 Hb_001205_030 Hb_001205_030 Hb_000634_070--Hb_001205_030 Hb_028207_040 Hb_028207_040 Hb_000634_070--Hb_028207_040 Hb_000062_080 Hb_000062_080 Hb_000976_290--Hb_000062_080 Hb_127599_010 Hb_127599_010 Hb_000976_290--Hb_127599_010 Hb_003494_060 Hb_003494_060 Hb_000976_290--Hb_003494_060 Hb_000010_350 Hb_000010_350 Hb_000976_290--Hb_000010_350 Hb_001141_360 Hb_001141_360 Hb_000976_290--Hb_001141_360 Hb_000809_090--Hb_005496_180 Hb_003605_240 Hb_003605_240 Hb_000809_090--Hb_003605_240 Hb_000179_240 Hb_000179_240 Hb_000809_090--Hb_000179_240 Hb_000318_480 Hb_000318_480 Hb_000809_090--Hb_000318_480 Hb_000483_040 Hb_000483_040 Hb_000809_090--Hb_000483_040 Hb_189208_020 Hb_189208_020 Hb_002097_200--Hb_189208_020 Hb_088753_010 Hb_088753_010 Hb_002097_200--Hb_088753_010 Hb_000987_060 Hb_000987_060 Hb_002097_200--Hb_000987_060 Hb_010381_030 Hb_010381_030 Hb_002097_200--Hb_010381_030 Hb_008511_100 Hb_008511_100 Hb_002097_200--Hb_008511_100 Hb_003752_100 Hb_003752_100 Hb_002097_200--Hb_003752_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
3.2495 28.5428 6.20924 5.89875 6.10092 3.11736
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.15975 7.19269 11.6408 9.34526 1.84159

CAGE analysis