Hb_066655_010

Information

Type -
Description -
Location Contig66655: 290-649
Sequence    

Annotation

kegg
ID rcu:RCOM_0919290
description hypothetical protein
nr
ID XP_012076354.1
description PREDICTED: abnormal long morphology protein 1 isoform X3 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID B9RNN6
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0919290 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_066655_010 0.0 - - PREDICTED: abnormal long morphology protein 1 isoform X3 [Jatropha curcas]
2 Hb_002918_310 0.2953357135 - - PREDICTED: dnaJ protein homolog 1-like [Jatropha curcas]
3 Hb_000941_140 0.2986737185 - - PREDICTED: activator of 90 kDa heat shock protein ATPase homolog 1 [Jatropha curcas]
4 Hb_002999_060 0.2992119121 - - PREDICTED: E3 ubiquitin-protein ligase RNF181 [Jatropha curcas]
5 Hb_030827_060 0.3018165545 transcription factor TF Family: HSF PREDICTED: heat stress transcription factor B-2b [Jatropha curcas]
6 Hb_003327_030 0.3071787106 - - Hsc70-interacting protein, putative [Ricinus communis]
7 Hb_000122_250 0.3077376071 transcription factor TF Family: ERF Dehydration-responsive element-binding protein 2C, putative [Ricinus communis]
8 Hb_004650_080 0.3082964144 - - -
9 Hb_002383_030 0.3086645221 - - hypothetical protein JCGZ_09913 [Jatropha curcas]
10 Hb_018118_050 0.3110147337 - - hypothetical protein POPTR_0006s07370g [Populus trichocarpa]
11 Hb_008864_040 0.3113508851 - - PREDICTED: pentatricopeptide repeat-containing protein At2g15980 [Jatropha curcas]
12 Hb_004296_010 0.3115979216 - - PREDICTED: activator of 90 kDa heat shock protein ATPase homolog 1 [Jatropha curcas]
13 Hb_061411_010 0.3116594576 - - PREDICTED: ATPase WRNIP1 [Jatropha curcas]
14 Hb_000179_140 0.3137007071 - - phospholipid:diacylglycerol acyltransferase 1-like [Jatropha curcas]
15 Hb_035947_010 0.314754005 - - PREDICTED: serine/threonine-protein phosphatase 7 long form homolog [Elaeis guineensis]
16 Hb_002965_030 0.3161929858 - - PREDICTED: uncharacterized protein LOC105643493 [Jatropha curcas]
17 Hb_035123_010 0.3166164058 - - hypothetical protein JCGZ_26658 [Jatropha curcas]
18 Hb_002233_100 0.3186997083 - - PREDICTED: cleavage and polyadenylation specificity factor subunit 6-like [Malus domestica]
19 Hb_000140_370 0.3190711613 - - PREDICTED: BAG family molecular chaperone regulator 6 [Jatropha curcas]
20 Hb_000418_070 0.3201130429 - - auxin:hydrogen symporter, putative [Ricinus communis]

Gene co-expression network

sample Hb_066655_010 Hb_066655_010 Hb_002918_310 Hb_002918_310 Hb_066655_010--Hb_002918_310 Hb_000941_140 Hb_000941_140 Hb_066655_010--Hb_000941_140 Hb_002999_060 Hb_002999_060 Hb_066655_010--Hb_002999_060 Hb_030827_060 Hb_030827_060 Hb_066655_010--Hb_030827_060 Hb_003327_030 Hb_003327_030 Hb_066655_010--Hb_003327_030 Hb_000122_250 Hb_000122_250 Hb_066655_010--Hb_000122_250 Hb_000720_070 Hb_000720_070 Hb_002918_310--Hb_000720_070 Hb_001534_070 Hb_001534_070 Hb_002918_310--Hb_001534_070 Hb_012340_020 Hb_012340_020 Hb_002918_310--Hb_012340_020 Hb_002965_030 Hb_002965_030 Hb_002918_310--Hb_002965_030 Hb_035947_010 Hb_035947_010 Hb_002918_310--Hb_035947_010 Hb_000152_560 Hb_000152_560 Hb_002918_310--Hb_000152_560 Hb_004296_010 Hb_004296_010 Hb_000941_140--Hb_004296_010 Hb_006618_040 Hb_006618_040 Hb_000941_140--Hb_006618_040 Hb_000062_110 Hb_000062_110 Hb_000941_140--Hb_000062_110 Hb_019516_030 Hb_019516_030 Hb_000941_140--Hb_019516_030 Hb_000454_190 Hb_000454_190 Hb_000941_140--Hb_000454_190 Hb_001232_100 Hb_001232_100 Hb_000941_140--Hb_001232_100 Hb_013394_060 Hb_013394_060 Hb_002999_060--Hb_013394_060 Hb_002999_060--Hb_002965_030 Hb_002999_060--Hb_030827_060 Hb_002999_060--Hb_000720_070 Hb_000483_380 Hb_000483_380 Hb_002999_060--Hb_000483_380 Hb_000422_110 Hb_000422_110 Hb_002999_060--Hb_000422_110 Hb_030827_060--Hb_000422_110 Hb_026198_040 Hb_026198_040 Hb_030827_060--Hb_026198_040 Hb_104265_030 Hb_104265_030 Hb_030827_060--Hb_104265_030 Hb_018133_030 Hb_018133_030 Hb_030827_060--Hb_018133_030 Hb_004449_050 Hb_004449_050 Hb_030827_060--Hb_004449_050 Hb_097433_010 Hb_097433_010 Hb_003327_030--Hb_097433_010 Hb_003327_030--Hb_035947_010 Hb_002814_120 Hb_002814_120 Hb_003327_030--Hb_002814_120 Hb_000406_040 Hb_000406_040 Hb_003327_030--Hb_000406_040 Hb_004635_130 Hb_004635_130 Hb_003327_030--Hb_004635_130 Hb_003327_030--Hb_002918_310 Hb_000122_250--Hb_013394_060 Hb_002344_090 Hb_002344_090 Hb_000122_250--Hb_002344_090 Hb_000122_250--Hb_002999_060 Hb_000122_250--Hb_000720_070 Hb_003517_060 Hb_003517_060 Hb_000122_250--Hb_003517_060 Hb_000538_010 Hb_000538_010 Hb_000122_250--Hb_000538_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.513402 0.704973 0 0.398271 1.20848 0.0951809
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.246205 0 0.597174 0.085029 0.326837

CAGE analysis