Hb_004296_010

Information

Type -
Description -
Location Contig4296: 24942-26618
Sequence    

Annotation

kegg
ID rcu:RCOM_0278300
description Hsp90 co-chaperone AHA1, putative
nr
ID XP_012087795.1
description PREDICTED: activator of 90 kDa heat shock protein ATPase homolog 1 [Jatropha curcas]
swissprot
ID O95433
description Activator of 90 kDa heat shock protein ATPase homolog 1 OS=Homo sapiens GN=AHSA1 PE=1 SV=1
trembl
ID A0A067JYP8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25570 PE=4 SV=1
Gene Ontology
ID GO:0005634
description aha1 domain-containing protein isoform 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_42142: 24992-26783
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004296_010 0.0 - - PREDICTED: activator of 90 kDa heat shock protein ATPase homolog 1 [Jatropha curcas]
2 Hb_000941_140 0.1110565398 - - PREDICTED: activator of 90 kDa heat shock protein ATPase homolog 1 [Jatropha curcas]
3 Hb_006618_040 0.1292061786 - - PREDICTED: hsp70-Hsp90 organizing protein 3-like [Jatropha curcas]
4 Hb_000260_370 0.164527457 - - protein phosphatase-1, putative [Ricinus communis]
5 Hb_001269_310 0.1754364379 - - PREDICTED: probable CCR4-associated factor 1 homolog 6 [Jatropha curcas]
6 Hb_002999_060 0.1780046329 - - PREDICTED: E3 ubiquitin-protein ligase RNF181 [Jatropha curcas]
7 Hb_013394_060 0.1809708517 - - PREDICTED: IST1-like protein isoform X1 [Jatropha curcas]
8 Hb_017491_070 0.1911628368 - - PREDICTED: dnaJ homolog subfamily B member 6-like isoform X1 [Jatropha curcas]
9 Hb_020094_020 0.1924189338 - - PREDICTED: 17.1 kDa class II heat shock protein-like [Pyrus x bretschneideri]
10 Hb_000302_300 0.1932978788 - - PREDICTED: heat shock protein 83 [Populus euphratica]
11 Hb_002965_030 0.1939644908 - - PREDICTED: uncharacterized protein LOC105643493 [Jatropha curcas]
12 Hb_000062_110 0.1949612064 transcription factor TF Family: MYB hypothetical protein JCGZ_17894 [Jatropha curcas]
13 Hb_000505_110 0.1971405284 - - PREDICTED: pyrophosphate-energized vacuolar membrane proton pump [Jatropha curcas]
14 Hb_018118_050 0.1979856548 - - hypothetical protein POPTR_0006s07370g [Populus trichocarpa]
15 Hb_023001_070 0.203697721 - - PREDICTED: dnaJ protein ERDJ3A-like [Eucalyptus grandis]
16 Hb_002400_230 0.2038335411 transcription factor TF Family: FAR1 PREDICTED: protein FAR1-RELATED SEQUENCE 6-like [Jatropha curcas]
17 Hb_001195_190 0.2053277316 - - conserved hypothetical protein [Ricinus communis]
18 Hb_001232_100 0.2099057382 - - Heat shock 70 kDa protein, putative [Ricinus communis]
19 Hb_000334_170 0.2118645842 - - PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP42 isoform X1 [Jatropha curcas]
20 Hb_000997_150 0.2120491423 - - ankyrin repeat-containing protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_004296_010 Hb_004296_010 Hb_000941_140 Hb_000941_140 Hb_004296_010--Hb_000941_140 Hb_006618_040 Hb_006618_040 Hb_004296_010--Hb_006618_040 Hb_000260_370 Hb_000260_370 Hb_004296_010--Hb_000260_370 Hb_001269_310 Hb_001269_310 Hb_004296_010--Hb_001269_310 Hb_002999_060 Hb_002999_060 Hb_004296_010--Hb_002999_060 Hb_013394_060 Hb_013394_060 Hb_004296_010--Hb_013394_060 Hb_000941_140--Hb_006618_040 Hb_000062_110 Hb_000062_110 Hb_000941_140--Hb_000062_110 Hb_019516_030 Hb_019516_030 Hb_000941_140--Hb_019516_030 Hb_000454_190 Hb_000454_190 Hb_000941_140--Hb_000454_190 Hb_001232_100 Hb_001232_100 Hb_000941_140--Hb_001232_100 Hb_006618_040--Hb_001232_100 Hb_000334_170 Hb_000334_170 Hb_006618_040--Hb_000334_170 Hb_000343_110 Hb_000343_110 Hb_006618_040--Hb_000343_110 Hb_002400_230 Hb_002400_230 Hb_006618_040--Hb_002400_230 Hb_002965_030 Hb_002965_030 Hb_000260_370--Hb_002965_030 Hb_000260_370--Hb_002999_060 Hb_000422_110 Hb_000422_110 Hb_000260_370--Hb_000422_110 Hb_000260_370--Hb_006618_040 Hb_000260_370--Hb_013394_060 Hb_000997_150 Hb_000997_150 Hb_001269_310--Hb_000997_150 Hb_004223_110 Hb_004223_110 Hb_001269_310--Hb_004223_110 Hb_001051_090 Hb_001051_090 Hb_001269_310--Hb_001051_090 Hb_001269_310--Hb_002400_230 Hb_000175_630 Hb_000175_630 Hb_001269_310--Hb_000175_630 Hb_003026_030 Hb_003026_030 Hb_001269_310--Hb_003026_030 Hb_002999_060--Hb_013394_060 Hb_002999_060--Hb_002965_030 Hb_030827_060 Hb_030827_060 Hb_002999_060--Hb_030827_060 Hb_000720_070 Hb_000720_070 Hb_002999_060--Hb_000720_070 Hb_000483_380 Hb_000483_380 Hb_002999_060--Hb_000483_380 Hb_002999_060--Hb_000422_110 Hb_013394_060--Hb_000483_380 Hb_013394_060--Hb_002965_030 Hb_013394_060--Hb_000720_070 Hb_013394_060--Hb_030827_060 Hb_000538_010 Hb_000538_010 Hb_013394_060--Hb_000538_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
43.7034 139.309 58.7693 66.2057 265.89 30.3321
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
14.8408 12.6379 23.7672 18.6788 78.223

CAGE analysis