Hb_006618_040

Information

Type -
Description -
Location Contig6618: 43915-47632
Sequence    

Annotation

kegg
ID rcu:RCOM_1679700
description heat shock protein 70 (HSP70)-interacting protein, putative
nr
ID XP_012087126.1
description PREDICTED: hsp70-Hsp90 organizing protein 3-like [Jatropha curcas]
swissprot
ID Q9STH1
description Hsp70-Hsp90 organizing protein 3 OS=Arabidopsis thaliana GN=HOP3 PE=2 SV=1
trembl
ID A0A067JNR3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20777 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_53056: 44016-47633
cDNA
(Sanger)
(ID:Location)		 006_M12.ab1: 47124-47501 , 046_D09.ab1: 47124-47502

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006618_040 0.0 - - PREDICTED: hsp70-Hsp90 organizing protein 3-like [Jatropha curcas]
2 Hb_001232_100 0.1166931467 - - Heat shock 70 kDa protein, putative [Ricinus communis]
3 Hb_000334_170 0.1216245134 - - PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP42 isoform X1 [Jatropha curcas]
4 Hb_000343_110 0.1240108778 - - Heat shock 70 kDa protein, putative [Ricinus communis]
5 Hb_000941_140 0.1279213707 - - PREDICTED: activator of 90 kDa heat shock protein ATPase homolog 1 [Jatropha curcas]
6 Hb_002400_230 0.1285931761 transcription factor TF Family: FAR1 PREDICTED: protein FAR1-RELATED SEQUENCE 6-like [Jatropha curcas]
7 Hb_004296_010 0.1292061786 - - PREDICTED: activator of 90 kDa heat shock protein ATPase homolog 1 [Jatropha curcas]
8 Hb_152540_010 0.1336696401 - - -
9 Hb_000260_560 0.1381760926 - - PREDICTED: pentatricopeptide repeat-containing protein At3g18110, chloroplastic [Jatropha curcas]
10 Hb_010417_060 0.1421657637 - - PREDICTED: protein SGT1 homolog A-like [Jatropha curcas]
11 Hb_000062_110 0.1424736417 transcription factor TF Family: MYB hypothetical protein JCGZ_17894 [Jatropha curcas]
12 Hb_000573_060 0.1439608315 - - PREDICTED: eukaryotic translation initiation factor 2D isoform X1 [Jatropha curcas]
13 Hb_001454_170 0.1461725232 - - PREDICTED: uncharacterized protein LOC105643431 [Jatropha curcas]
14 Hb_009674_080 0.1485150427 - - PREDICTED: branchpoint-bridging protein [Jatropha curcas]
15 Hb_000086_150 0.1520414491 transcription factor TF Family: Jumonji PREDICTED: putative lysine-specific demethylase JMJ16 isoform X1 [Jatropha curcas]
16 Hb_001301_130 0.1544235632 - - PREDICTED: uncharacterized protein LOC105632935 [Jatropha curcas]
17 Hb_000329_100 0.154837366 - - PREDICTED: uncharacterized protein LOC105643144 [Jatropha curcas]
18 Hb_002687_090 0.1582674707 - - PREDICTED: PAX3- and PAX7-binding protein 1 [Jatropha curcas]
19 Hb_000661_200 0.1588084457 - - PREDICTED: uncharacterized protein LOC105648311 isoform X1 [Jatropha curcas]
20 Hb_009486_080 0.158970514 - - PREDICTED: uncharacterized protein LOC105643242 [Jatropha curcas]

Gene co-expression network

sample Hb_006618_040 Hb_006618_040 Hb_001232_100 Hb_001232_100 Hb_006618_040--Hb_001232_100 Hb_000334_170 Hb_000334_170 Hb_006618_040--Hb_000334_170 Hb_000343_110 Hb_000343_110 Hb_006618_040--Hb_000343_110 Hb_000941_140 Hb_000941_140 Hb_006618_040--Hb_000941_140 Hb_002400_230 Hb_002400_230 Hb_006618_040--Hb_002400_230 Hb_004296_010 Hb_004296_010 Hb_006618_040--Hb_004296_010 Hb_000260_560 Hb_000260_560 Hb_001232_100--Hb_000260_560 Hb_001232_100--Hb_000334_170 Hb_000573_060 Hb_000573_060 Hb_001232_100--Hb_000573_060 Hb_006052_030 Hb_006052_030 Hb_001232_100--Hb_006052_030 Hb_000329_100 Hb_000329_100 Hb_001232_100--Hb_000329_100 Hb_000334_170--Hb_000260_560 Hb_001040_070 Hb_001040_070 Hb_000334_170--Hb_001040_070 Hb_000175_630 Hb_000175_630 Hb_000334_170--Hb_000175_630 Hb_000264_230 Hb_000264_230 Hb_000334_170--Hb_000264_230 Hb_000041_300 Hb_000041_300 Hb_000334_170--Hb_000041_300 Hb_011344_020 Hb_011344_020 Hb_000343_110--Hb_011344_020 Hb_000343_110--Hb_000573_060 Hb_002044_170 Hb_002044_170 Hb_000343_110--Hb_002044_170 Hb_128743_010 Hb_128743_010 Hb_000343_110--Hb_128743_010 Hb_158604_010 Hb_158604_010 Hb_000343_110--Hb_158604_010 Hb_032920_130 Hb_032920_130 Hb_000343_110--Hb_032920_130 Hb_000941_140--Hb_004296_010 Hb_000062_110 Hb_000062_110 Hb_000941_140--Hb_000062_110 Hb_019516_030 Hb_019516_030 Hb_000941_140--Hb_019516_030 Hb_000454_190 Hb_000454_190 Hb_000941_140--Hb_000454_190 Hb_000941_140--Hb_001232_100 Hb_000732_070 Hb_000732_070 Hb_002400_230--Hb_000732_070 Hb_001454_170 Hb_001454_170 Hb_002400_230--Hb_001454_170 Hb_000334_130 Hb_000334_130 Hb_002400_230--Hb_000334_130 Hb_001454_220 Hb_001454_220 Hb_002400_230--Hb_001454_220 Hb_152540_010 Hb_152540_010 Hb_002400_230--Hb_152540_010 Hb_004032_230 Hb_004032_230 Hb_002400_230--Hb_004032_230 Hb_000260_370 Hb_000260_370 Hb_004296_010--Hb_000260_370 Hb_001269_310 Hb_001269_310 Hb_004296_010--Hb_001269_310 Hb_002999_060 Hb_002999_060 Hb_004296_010--Hb_002999_060 Hb_013394_060 Hb_013394_060 Hb_004296_010--Hb_013394_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
106.504 332.336 163.495 119.676 497.216 116.906
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
52.2294 45.0452 73.0783 118.954 247.94

CAGE analysis